Gene SO_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1068 
Symbol 
ID1168905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1108836 
End bp1109273 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content48% 
IMG OID637343024 
Producthypothetical protein 
Protein accessionNP_716695 
Protein GI24372653 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT GGTTTAGACC GGTAACCTTA GAAGATTGTG CACGTTTAGA TGCTGGAATG 
GGCGGCAAAG GCACCCTGAT GCAAACCTTA GGGATTGAAA TCAGCGAGAT TGGTGATGAC 
TATATGAAGG CCACAATGCC TGCAACGCCT GCGGTACATA ATCCGTTGGG CATTGTGCAC 
GGTGGCGCGA ATGTAGCATT AGCCGAAACG GTGGCCAGTT ATGCCGCGAA TTTTGCGGTG 
GATTTTGAGC AATATTATTG TGTAGGGCAA GAGATTAATG CCAACCATTT ACGCGCTTCA 
CGTAATGGCG TGTTAACGGC AACAGCAAAA CCCATTCATG TGGGGAAGCG TAGCTCGGTA 
TGGGAAATCT TAATCCATAA CAGTGCAGGG GAGTTGACCT GTATTTCACG GATGACGGCA 
GCGGTAGTCA AACGCTAG
 
Protein sequence
MSIWFRPVTL EDCARLDAGM GGKGTLMQTL GIEISEIGDD YMKATMPATP AVHNPLGIVH 
GGANVALAET VASYAANFAV DFEQYYCVGQ EINANHLRAS RNGVLTATAK PIHVGKRSSV 
WEILIHNSAG ELTCISRMTA AVVKR