| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1066 |
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| Symbol | |
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| ID | 1168903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1105523 |
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| End bp | 1108138 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343022 |
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| Product | extracellular nuclease |
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| Protein accession | NP_716693 |
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| Protein GI | 24372651 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATG TTAATAAGTT AACAGCTGTT TCTTTAGCTG TAGCCGCGGC TTTGCCTATG
ATGGCAAACG CTAATGTAAT GATCACTGAG TATGTTGAAG GTAGCTCAAA TAACAAAGCG
ATTGAATTAT ATAACAGTGG CAATACAGCA ATAGATCTTA CCGGTTATAA ACTCGTTCGT
TATAAAGATG GCGCCACCGA TGCGGCAGAT ATGCAAGTGT TAGATGGACA AAGCATCGCA
CCTAAAGCTA CTAAAGTCAT TCTCAATTCA AGTGGTGTTA TTACCCTGCC TCAAGGCGTT
GATAGTTTTT CTGGTACCTT AAGTTTTAAC GGTGGCGATG CGGTTGCCTT AGTTAAAGAT
GGTGCGGTTG TCGATATTAT TGGTGACGTG CCAACCCCTG TGGGTTGGGG GCTTGATGTT
ACCCTTAAGC GCAAGCTTGA CTCATTAGTG GCAAATACTG TCTTTAATCC TGCCCAGTGG
GAACAATTAC CTAAAGATAC TTTCACTGGC CTTGGCTCAC TGGATACCCC TACTAAGCCT
GAAACACCTG CATTTAGCTG CAGCGGTGCA AAAATTGTCC CAATTTACCA AGTTCAAGGT
GCGGGAGAGT CTAGTCCTTA TGTGCCAGCT GGCGCATTCG AGTCTGAAAG CGAAGTAACC
GTTCGCGGTG TCGTCACTGC CCGTGGTGAG AATTTATTTA AAGGTTTTTA TCTACAAGAA
GTGAAGGGTG ATAACTCGCC ATACACTTCC GATGGTGTAT TTGTGTTTTT AGGTGAAGCG
CCACCTCCAG CGATTCAGCC TGGGGTTGAA ATTTGTGTTC AGGGTAAGGT GAAGGAATAC
TTCGGCTTGA CTCAAATTGA TATCAAAACC GATAAGAAAT TTGAAGCTGG CACTAAGGGT
GAAGTCCCAG TCGCCGCGCC TTTCTATGTT GCAGAAGGTG AAACTTTAGC TCAGGCATTA
GAGCGTTTTG AAGGGATGAA TGTACTATTG GATGCGGGCA GCGATTTGAA GATCAACCGT
ACCTTTAGCT ACGACTACGC AGGTAAGCGC AATAACATGT TGGTGTCATA CAAAGCACCC
CTGATGAAGC CGACCCAGTT ATATCCAGCA CTTTCTGCCG AGGCGACGGC ATTAGCTAAA
TCAAACCGCG AGAATCAGCT GTTTATTGAA TCCGATTACA AGCCTGCGGA TGGCATTATT
CCTTACTTCC CCGACTTTAA CGCCGAAACA GGTTATATCC GCGTGGGCGA TCAACTGACA
AATCTGCAAG GTGTGGTTGG CTACAGCTAC GGGGCTTACC GTTTAGTGGC AACTAATACT
ATTACTGCTG GCGATTTTAT CCGTGGCGAT GATAGAACCG ATGCACCCAG CGTGGCCACC
AAAGGCGATA TTCGTGTGGC CAGTTTCAAC GTGCTTAACT TCTTCAACGA TGTTGTGGGT
GGCGATACTA ACCCATCAGG TGGTAACCGC GGCGCATTGA CCGAAGAAGA AATGCTATTA
CAACGCACAA AAATCGTCAG TGCGATTACC GCCATGAATG CCGATATCGT TGGCTTAATG
GAAATTGCTA ACAACGGTTT TGGCGAAAAG AGCGCGATTA AGAACTTGGT CGATGCCTTA
AACGAGAAGC AAACCACAGA AAATGCTTAC AGCTATATTC AAATCGCCGA CACAGATAAA
TACGACGGCA AGTACTTTGG TAGCGATGCC ATTACTGTTG GTATGCTTTA TCGTGCTGGT
AAAGTAAGCC TTGCGGGTGC GGCTCGTACT ATTGAAACTC CTGAGCAACA TGCGAGTGTG
GGCAGTGTGA CTCGCATTAA AGATGGCAAG ACTGAGACTA ACCCTGGCAA TGATGCTTAC
CAACGTCACA GCTTAGCGCA AACCTTTAAG ATCCATGATC AAAACTTAAC CGTTGTTGTT
AACCACCTTA AATCAAAGAA TTCAGGCTGT TTGGAAGATT GGGTTAACTT CGAAGAGTCA
GTCGATCCTG CTGATCTACA GGGTAGATGT AACGAATTCC GTGTGTCAGC GGCGAAAGTG
TTAGGTGAAG CGTTAAAAGA CGTGAAAGGC GATTTACTGG TTATCGGCGA TATGAATGCC
TATGGTATGG AAGATCCTCT GCGCGTATTG ACTGACTTCG ATGCCAGCAA GTCTGACCGC
GACATCATGA CTGCCTCTTG GACCACCTTA AATGGCAAAG TGTATGAACG CCAAGGTAGC
AAGATTGACA AGGGCTATGG TCTTATCAAT CTCAATACTA AAGCTCACGG TACTGGCACT
TACTCATACA GCTACAATGG TGAGTTAGGC AACCTCGACC ATGCCTTGGC AAACACTAGC
CTTGCCAAGC GTTTAGTGGA TATCGAAGAT TGGCATATCA ACTCGGTGGA GTCTAGCCTG
TTCGAATTCG GTAAAAAATT CTCAGGTAAT CTTGTCAAAT CTGAGAATGC GTTTTCTGCT
TCAGACCATG ACCCTGTGAT TGTGGCGTTA AGCTATCCAG CACCTGTGGT GCCACCAAAA
CCGCAGCCGA CGCCAAAGGA TGATGGCGGT GCGCTAGGTT ACTTGGGCTT AGCCTTGTTA
TCGCTATTGG GTTTACAACG TCGTCGCCGT TATTGA
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| Protein sequence | MENVNKLTAV SLAVAAALPM MANANVMITE YVEGSSNNKA IELYNSGNTA IDLTGYKLVR
YKDGATDAAD MQVLDGQSIA PKATKVILNS SGVITLPQGV DSFSGTLSFN GGDAVALVKD
GAVVDIIGDV PTPVGWGLDV TLKRKLDSLV ANTVFNPAQW EQLPKDTFTG LGSLDTPTKP
ETPAFSCSGA KIVPIYQVQG AGESSPYVPA GAFESESEVT VRGVVTARGE NLFKGFYLQE
VKGDNSPYTS DGVFVFLGEA PPPAIQPGVE ICVQGKVKEY FGLTQIDIKT DKKFEAGTKG
EVPVAAPFYV AEGETLAQAL ERFEGMNVLL DAGSDLKINR TFSYDYAGKR NNMLVSYKAP
LMKPTQLYPA LSAEATALAK SNRENQLFIE SDYKPADGII PYFPDFNAET GYIRVGDQLT
NLQGVVGYSY GAYRLVATNT ITAGDFIRGD DRTDAPSVAT KGDIRVASFN VLNFFNDVVG
GDTNPSGGNR GALTEEEMLL QRTKIVSAIT AMNADIVGLM EIANNGFGEK SAIKNLVDAL
NEKQTTENAY SYIQIADTDK YDGKYFGSDA ITVGMLYRAG KVSLAGAART IETPEQHASV
GSVTRIKDGK TETNPGNDAY QRHSLAQTFK IHDQNLTVVV NHLKSKNSGC LEDWVNFEES
VDPADLQGRC NEFRVSAAKV LGEALKDVKG DLLVIGDMNA YGMEDPLRVL TDFDASKSDR
DIMTASWTTL NGKVYERQGS KIDKGYGLIN LNTKAHGTGT YSYSYNGELG NLDHALANTS
LAKRLVDIED WHINSVESSL FEFGKKFSGN LVKSENAFSA SDHDPVIVAL SYPAPVVPPK
PQPTPKDDGG ALGYLGLALL SLLGLQRRRR Y
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