Gene SO_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1064 
Symbol 
ID1168901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1103088 
End bp1104038 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content48% 
IMG OID637343020 
Producthypothetical protein 
Protein accessionNP_716691 
Protein GI24372649 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CCCTACTGCT GGTAATTTGC ACGATGTTTT TAACTGCATG CCACCCCAGA 
GCCGACGATA TTCGCGAGCT CTCAAAAGAG CCTTCTTACA GTGCCAGCCT CTCAAGTGAT
GGCACGCTTG CCATTATCGC CACACAGAGT CAGGGAGTGC AGTGTTGGGA CTTAATCCAT
CACACCCTAA AATACCAATG GATACATGGT GACCTCAATA CAGGCGTGAC CAGCACAGCC
ATTTCGCCTA ATGGTGAGTT TGTTGCATCG TTAAGCCGCG ATTCAGTTGT GCTATGGACA
ATTGCCGATG GAAAATCCCT CGGTTGGTGG TCACTGCCAT CATCGGGAGA AAGTGTTGCG
GTGGCCAACA ATGGGGCTTT ACTTATCGGC TTAAACGATG GCAGCGTTAT GTCCCTCAAT
GCGGCTAAAA CGGCACTGAT TAAGTTTTTA GGTCATAAAG AACGAGTCAA TACGGTTGCC
ATTTCAGCAG ATGGGCGCAT AGCGCTTACG GGTTCAAATG ATATGCAGGC CATTTTATGG
CAAGCGCAGA GCGGGCAGCC TATCCACACT TGGGATCTGG GCAGTCGAGT GACTAAAGTA
GCACTGAACG ACAGTGGCAG TTTAAGTTTT ACCAATGGCA GTACTAATGA AGCAAAAATA
TGGGACAATG CAAGCGGTAA GCTTTTAAAT CAATTAGAGA TTAACCGTCG CCAAATGACC
TTTTCAGCGG TACGATTTAC TCAGCAAGAC AACCAGTTAT TAACCGGTAC CCCCGCCCGC
GAAGTCACAC TCTGGCAACG CAATACGGGG AAACCTATTG CCCAATGGCA AATTGCGCTG
ACGAAAAACA GCCAAAACCG TGGAGCCGTT GTATACTCTG TGGCAATTCG AGATACCAAT
AAAATCGTTA GTATCAGTAG CCAAGGCTTA GTCGAGACTT GGCAACAATA G
 
Protein sequence
MKKTLLLVIC TMFLTACHPR ADDIRELSKE PSYSASLSSD GTLAIIATQS QGVQCWDLIH 
HTLKYQWIHG DLNTGVTSTA ISPNGEFVAS LSRDSVVLWT IADGKSLGWW SLPSSGESVA
VANNGALLIG LNDGSVMSLN AAKTALIKFL GHKERVNTVA ISADGRIALT GSNDMQAILW
QAQSGQPIHT WDLGSRVTKV ALNDSGSLSF TNGSTNEAKI WDNASGKLLN QLEINRRQMT
FSAVRFTQQD NQLLTGTPAR EVTLWQRNTG KPIAQWQIAL TKNSQNRGAV VYSVAIRDTN
KIVSISSQGL VETWQQ