Gene SO_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1053 
Symbol 
ID1168891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1091257 
End bp1092105 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content50% 
IMG OID637343011 
Producthypothetical protein 
Protein accessionNP_716681 
Protein GI24372639 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAT ATTTCTTAGG AGTCAGTTTG GAGTCACTTA AGTCACTGCC GCGCCAAACC 
AATCATTTGC GTCTTGGGCT TGCCATGTGG TCACATTACC ATTGGCAAGA TAGTGTTTAT
GGTTCAACAA CCAAACAAGC CGAGCGCCTT GCCCGTTATG CAACCATTTT TAACACGGTA
GAAGGGAATA CCAGTTTTTA CGCTACGCCA AATGCACAAA CTATGATGAA CTGGCTCAGA
GCTACCCCAG ATGACTTTCG CTTTACCTTT AAGCTACCGC AGACGATCAC CCATCAAAAG
CAACTACAGC ATTGTCAGCA GGAGCTTCTG CAATTCTTTC AAGTCATGTC GCCCTTGGCA
GAAAAAACCG GGCTATGGAA GATCCAACTT CCCGCCCATT TCGGCCCAGA AAACTTGCCT
GCGTTAGCGC AATTTCTCAA TCAAGTCCCC CAAGGGTTAA CCTATGGCGT CGAAGTCAGG
CATGCTGCGT TTTTTGCCAA GGGAGAGGCT GAGCGAGCGC TAAACCGCTT GCTGATGGAT
AAACAGGTGA ACCGCATCAT TATGGACAGT CGGCCACTGT TTGCTCTGCC ACCCGCTAAC
GAGGCGATTA TCGATACCCA TAAGAAAAAA CCGCGGGTGC CAGTGCATGC AATCGCGACT
GCCAATACGC CTGTGGTTCG CTTTATCGGG CAACCTGACG ATGCATGCAG TTGCACAACT
CGCGCAGCAA GGCGTTAG
 
Protein sequence
MAEQSRILFK ALHQQSEPLI LTNAWDAASA AIIQASGARA IATSSAALAW SLGYPDGQAL 
PKVALLDVVN NILRLSRVPV TIDIESGYSQ DPDGVAAFVA QLAELGVAGI NIEDGSAGVA
EMVAKIKAIR AHPRCQGLFI NARADVYLLG LASGEAAVVM TIDRLTQYQA AGADGGFIPG
ATEVETAKRL SAAVDMPLNF MLLNEQMDIG ELFAAGVQRF STGPASFLQA YSTLLNPILL
NSIKAKPFQR ESNDAVIAAD KDSIPKAISL GFEQVNNLFI PS