Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1053 |
Symbol | |
ID | 1168891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1091257 |
End bp | 1092105 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343011 |
Product | hypothetical protein |
Protein accession | NP_716681 |
Protein GI | 24372639 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAT ATTTCTTAGG AGTCAGTTTG GAGTCACTTA AGTCACTGCC GCGCCAAACC AATCATTTGC GTCTTGGGCT TGCCATGTGG TCACATTACC ATTGGCAAGA TAGTGTTTAT GGTTCAACAA CCAAACAAGC CGAGCGCCTT GCCCGTTATG CAACCATTTT TAACACGGTA GAAGGGAATA CCAGTTTTTA CGCTACGCCA AATGCACAAA CTATGATGAA CTGGCTCAGA GCTACCCCAG ATGACTTTCG CTTTACCTTT AAGCTACCGC AGACGATCAC CCATCAAAAG CAACTACAGC ATTGTCAGCA GGAGCTTCTG CAATTCTTTC AAGTCATGTC GCCCTTGGCA GAAAAAACCG GGCTATGGAA GATCCAACTT CCCGCCCATT TCGGCCCAGA AAACTTGCCT GCGTTAGCGC AATTTCTCAA TCAAGTCCCC CAAGGGTTAA CCTATGGCGT CGAAGTCAGG CATGCTGCGT TTTTTGCCAA GGGAGAGGCT GAGCGAGCGC TAAACCGCTT GCTGATGGAT AAACAGGTGA ACCGCATCAT TATGGACAGT CGGCCACTGT TTGCTCTGCC ACCCGCTAAC GAGGCGATTA TCGATACCCA TAAGAAAAAA CCGCGGGTGC CAGTGCATGC AATCGCGACT GCCAATACGC CTGTGGTTCG CTTTATCGGG CAACCTGACG ATGCATGCAG TTGCACAACT CGCGCAGCAA GGCGTTAG
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Protein sequence | MAEQSRILFK ALHQQSEPLI LTNAWDAASA AIIQASGARA IATSSAALAW SLGYPDGQAL PKVALLDVVN NILRLSRVPV TIDIESGYSQ DPDGVAAFVA QLAELGVAGI NIEDGSAGVA EMVAKIKAIR AHPRCQGLFI NARADVYLLG LASGEAAVVM TIDRLTQYQA AGADGGFIPG ATEVETAKRL SAAVDMPLNF MLLNEQMDIG ELFAAGVQRF STGPASFLQA YSTLLNPILL NSIKAKPFQR ESNDAVIAAD KDSIPKAISL GFEQVNNLFI PS
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