| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1044 |
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| Symbol | |
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| ID | 1168882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1082233 |
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| End bp | 1082967 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637343002 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_716672 |
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| Protein GI | 24372630 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT CCATGTTATT AGGCGGCCTA ACCCTCACTG CCACCTTGTT GTTAGCTGGA
TGTGGGAAAA GCGAAGATGT TTTAGTCGTA GGAACCAATG CCGCATTCCC GCCCTTTGAA
TATGTAGGCG GACAAAGTGG CGACGAAATC AAAGGTTTCG ACATTGAGCT TGCCAAGCAA
ATAGCTAAAG ATGCGGGCAA GACCCTAAAA GTCGAAAACA TGAAATTCGA CTCGCTGATC
GTGGCCCTAA ACTCAGGCAA GATTGATTTT ATCGCCTCGG GTATGACTAT CACCCCCGAG
CGGCAGGCAA GTGTTAACTT CTCTGAGCCC TATTACGAAG CCACTCAAGT GCTACTCGTC
AATAAAGATA ACGAGAGTAT TCATACGCTT GATGACATTA AAGATAAACA TTTTGCGGTA
CAGCTCGGCT CAACCGCCGA TATGATGTCT AAAAAATATA CCCAAAAGGT CACCGCCTTC
AATACCGGAT TCGAAGCCAT TATGGAGCTT AAAAATGGCA AAGTAGATCT TGTGTTGTTT
GACAGCGAAC CTGCTGCTAA CTATCTGGCG AAAAACCCCG ATCTCAAACT GATTAAGCTG
GATTTTCCTC CCGAGTTTTA TGGTTTTGCC GTCTCAAAAC AGCAACCTGA ACTCCTCAAT
AGCATTAATC ATACGCTGAA AAACCTGAAA GAAAACGGCC AGTATCAGGC ACTTGTTTCA
GCCCATATCA AGTGA
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| Protein sequence | MKKSMLLGGL TLTATLLLAG CGKSEDVLVV GTNAAFPPFE YVGGQSGDEI KGFDIELAKQ
IAKDAGKTLK VENMKFDSLI VALNSGKIDF IASGMTITPE RQASVNFSEP YYEATQVLLV
NKDNESIHTL DDIKDKHFAV QLGSTADMMS KKYTQKVTAF NTGFEAIMEL KNGKVDLVLF
DSEPAANYLA KNPDLKLIKL DFPPEFYGFA VSKQQPELLN SINHTLKNLK ENGQYQALVS
AHIK
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