Gene SO_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1033 
Symbol 
ID1168872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1072108 
End bp1072965 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID637342992 
Productiron-compound ABC transporter, ATP-binding protein, putative 
Protein accessionNP_716661 
Protein GI24372619 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACTCA ATGTCAGCCA ATTGAGTTGG ACCATCGAAG GCAAAACCAT TCTCTCTGGG 
GTTAACTTTG CCCTGCAGCG CGGTGAAATG CTGGGATTAA TCGGCCCTAA CGGGGCGGGT
AAATCCAGTT TACTGCGTTG TCTATATCGT TTTATTCGCC CGACTCAGGG GCAGATCAGC
TTGTTTTCGC AGGATATTAG TCAGCTTTCG CCCAAGGCAT TTGCCTGTAA AGTGGCCGTA
GTGCAGCAGG ATACGCCGCA CTATTTTGAT ATGACCACAG AGCAACTGGT TGCCATGGGA
CTCACGCCCC ATAAAGGAAT GTTTGATAGC CATTCCAGCG GTGATAGCGA CAAAATTATT
AAAGCGCTTG AGAAGGTTGG CCTTAGTCAT AAGTTGCATC AGCAATATGA GCGGCTTTCG
GGCGGCGAGA AACAACGGGC GCTGATTGCC CGCGCTATCG TGCAACAACC ACTGCTACTG
ATTTTAGATG AACCCACAAA TCACCTCGAT GTGCGCTACC AAATACAAAT TTTGGAGCTG
GTTCGAAGCC TTGGCATTAG TGTGATTGCC TCGATTCATG ATCTGAATCT GGCAAGCGCC
CTGTGTGATA GTTTGCTGCT ACTCGATAAT GGGCAAGTGA GCGCCATGGG CACGCCAACT
GAGGTGTTGA CTGAGGAGCG CATTGCCCAA GTTTTTGGGG TTTGCGCCCA AGTGATGCCC
CATCCACAAC ATGCTAACCC GTTGATTAAT TACTTCTATG GCTATCAAAA ATCATATGGC
TATCAAAAAT CAAAGACAGA TGAAGAGGGC GCAATCCATC CTCCCCATAT CATTAATGGG
GTGAAAACCC CATCATGA
 
Protein sequence
MALNVSQLSW TIEGKTILSG VNFALQRGEM LGLIGPNGAG KSSLLRCLYR FIRPTQGQIS 
LFSQDISQLS PKAFACKVAV VQQDTPHYFD MTTEQLVAMG LTPHKGMFDS HSSGDSDKII
KALEKVGLSH KLHQQYERLS GGEKQRALIA RAIVQQPLLL ILDEPTNHLD VRYQIQILEL
VRSLGISVIA SIHDLNLASA LCDSLLLLDN GQVSAMGTPT EVLTEERIAQ VFGVCAQVMP
HPQHANPLIN YFYGYQKSYG YQKSKTDEEG AIHPPHIING VKTPS