| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1031 |
|---|
| Symbol | |
|---|
| ID | 1168871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1070755 |
|---|
| End bp | 1071504 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637342991 |
|---|
| Product | alpha-ribazole-5'-phosphate phosphatase, putative |
|---|
| Protein accession | NP_716659 |
|---|
| Protein GI | 24372617 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG TTCGCTTATT ACTGTTGCGC CATGGGGAAT GCGAGGGCGG GGCGATTTTA
CGTGGCCGCG TTGATGTGCC TTTAAGTGCC AAGGGCTGGC GGCAGATGTC GGCGGCAGTC
GCTTTGCAGG TCTGTGAGTG CCACGGTATT TATAGCTCCA CCTCGAGGCG CTGTGCTGAA
TTTGCCAAGG TGTTGGCGAC TAAGCATGCT AGCGCGTCCG TCAGTTCAAG CTTCGCCAGT
GCCAGTTCAA ACTGCATCAG TTCAAACAAC TTTGCTGCGC CAACATCTTC GCCGCTTGAG
GTCAGCCTGC TGGAGGATCT ACAAGAAATG GATTTTGGCG ATTGGGATGG TCGCTTGCTC
GATGAGTTAT ATCAACAGGA TGGCGAGCGC ATGGCGGCCT ATTGGCAAGA TCCTTGGGCT
GTAGCGCCGC CCAAGGGTGA AACGATGGCC GATTTTGAGG CCCGAGTTGA TCGCGCAATT
GCGGCCATTC TCGAGCAAGC ATTTGCGTGC CTTCCCCTTG GTGATAAACC CGCCGATGCT
GCAGCTGATA CTGCGGCCAA TATTTGGGTG GTGACCCACG GTGGGGTGAT CCGTCATTTA
ATGGCGAGGG CGTTGGGGGC GGTGAAAGCC GTGGGTTTTT ATAGTCAGCT CACCCTGCCC
GTGGCGGCGC TGGTGACTAT CAATGTACTT GAAGATAACC AAGGGACTCG ATACTGGCGC
TTAGACTGGC CATCGGGCCA TGGTGAGTGA
|
|---|
| Protein sequence | MKQVRLLLLR HGECEGGAIL RGRVDVPLSA KGWRQMSAAV ALQVCECHGI YSSTSRRCAE
FAKVLATKHA SASVSSSFAS ASSNCISSNN FAAPTSSPLE VSLLEDLQEM DFGDWDGRLL
DELYQQDGER MAAYWQDPWA VAPPKGETMA DFEARVDRAI AAILEQAFAC LPLGDKPADA
AADTAANIWV VTHGGVIRHL MARALGAVKA VGFYSQLTLP VAALVTINVL EDNQGTRYWR
LDWPSGHGE
|
|---|
| |