Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1007 |
Symbol | |
ID | 1168847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1042150 |
End bp | 1043730 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637342967 |
Product | Na(+)/H(+) antiporter |
Protein accession | NP_716635 |
Protein GI | 24372593 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTA GTCATTTTGC CGACTCCGGT TGGTCAGTGC TTCCCCCTTT GTTAGCCGTC GCCTTGGCGA TCATCACTCG CCGCGTACTG TTATCCCTTG GCGTAGGGAT TGTGGCCGGC AGTTTGTTAC TCAATCAGTT TTCTCCCTTT GATTCATTGC ACTATATGTT CAATACCGTG CTGAGGATTT TTTGGGTCGA TGGCGCACTT AATCGCGACA ATATCAATAT GTTGCTGTTT ATGTTGCTGC TCGGTGGGCT GATTAGTTTG ATGAGCGTCT CTGGCGCCAC CCGCGCCTTT GCCGAATGGG CGGCCAAGCG CGCTAAAACT CGCCGCGGCG CTAAGGGCTT AACTGGCATC ATGGTGTTTG CATTTTTTAT CGATGATTTT TTCCACAGCT TATCGGTGGG GGCGATTTGC CGCCCGGTGA CCGACCGCTT TCAAATCTCC CGCGCCAAAC TGGCCTATCT TTTAGATTCC ACCGCCGCGC CCGTGTGTGT GCTGATGCCT ATCTCCTCTT GGGGCGCCTA TATTATCGCC CTCGTTGGCG GCATTATGGC GGCCCACGGC ATCACAGACC AAAGCCCCAT CTCCGCCTTT GTGGAGATGA TCCCGATGAA CCTTTACGCA GTGTTTACCC TGCTGATGGT GCTGGTGGTG ATTGCCTTTC AGCTCGATAT CGGCTCGATG CGCTGGCATG AAGAGCGTGC TTTGCAGGGC AAATTGTGGG ATGAATCTAA AGGCCGGCCG ATTGGCTTAG ATATGGAAAG CCCAGAGGAT AGCAACGGCG GCATGATTGA CATGGTGCTG CCCATCTTCA CCCTAACCGC CGCTACGGTT TACTTTATGA TTGACTCGGG CGCCGCGGTG CTTAGCGCGC AAGGGCTGCC CTTTAGTGTG CTTGGCTCCT TTGAAAACAC TAACGTAGGC TCATCGTTAG TGTATGGCGC TCTATGCAGC TTAGGGGTAT CGATTGCCTT GGCGCTGCGC CTAAAACTTG GCGCAAAAAA CTGGATCAAA GCCGCGCCCC AAGGCGTAAT GGCGATGCTG CCAGCCATCA ATATTCTGCT GTTTGCCTGG GCGATTGGCG CCGTAGTGCG CGATGTTGAA ACCGGTAAAT ACCTAGCCTC CCTTGCCAAT GGTAACTTGC CAATTGAAGT GTTGCCTGCA GTGGTGTTTG TGTTGTCCTG CGCCATGGCA TTTGCTACTG GCACCAGTTG GGGCACCTTT GGCATTATGC TACCCCTTGC TGGCGATATG GCCGCCGCAA GTGATATCAG TTTAATGCTA CCAATGCTTG CCGCAGTGCT CGCCGGCTCA GTGTTTGGTG ATCACAGCTC GCCGATTTCG AGCACTAGTA TTTTGTCGGC AACCGGCGCA GGTTGCCATC ATATCGACCA TGTGATGACC CAGCTGCCCT ACGCCCTTGC CATGGCCTTT GGCGCCGCCT TAGGCTACTT GGCCATGGGC TTTATGCATT CGACCTTAGC GGGTGTATGC GTTAGCGCCC TGTGGTTTAT CCTGTTTAGC GCCTATCACC TGCAAAAGGC TAAAACCCGC CAAGCGCTTG CGAGCGCCTA A
|
Protein sequence | MEISHFADSG WSVLPPLLAV ALAIITRRVL LSLGVGIVAG SLLLNQFSPF DSLHYMFNTV LRIFWVDGAL NRDNINMLLF MLLLGGLISL MSVSGATRAF AEWAAKRAKT RRGAKGLTGI MVFAFFIDDF FHSLSVGAIC RPVTDRFQIS RAKLAYLLDS TAAPVCVLMP ISSWGAYIIA LVGGIMAAHG ITDQSPISAF VEMIPMNLYA VFTLLMVLVV IAFQLDIGSM RWHEERALQG KLWDESKGRP IGLDMESPED SNGGMIDMVL PIFTLTAATV YFMIDSGAAV LSAQGLPFSV LGSFENTNVG SSLVYGALCS LGVSIALALR LKLGAKNWIK AAPQGVMAML PAINILLFAW AIGAVVRDVE TGKYLASLAN GNLPIEVLPA VVFVLSCAMA FATGTSWGTF GIMLPLAGDM AAASDISLML PMLAAVLAGS VFGDHSSPIS STSILSATGA GCHHIDHVMT QLPYALAMAF GAALGYLAMG FMHSTLAGVC VSALWFILFS AYHLQKAKTR QALASA
|
| |