| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0992 |
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| Symbol | lysS |
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| ID | 1168834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1025577 |
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| End bp | 1027079 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342954 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | NP_716620 |
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| Protein GI | 24372578 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC AAGTACAAGA TGAAAACAAA CTGATTGCCG AGCGTCGTGC CAAGCTAGAC
AGCATTCGCC CGAACTGCAG CGCGAATGCT CACCCTAATA CGTTCCGTCG CACCCATAAA
GCGGCAGAGT TGCAGGAAAA ATACGGTCAA AATACTAAGG AAGAACTCGA AGCCTTAGGT
TTTAGAACCA GCATCGCTGG CCGTATCATG GCAAAACGTG GCCCATTCCT AGTGATCCAA
GACGTGTCTG GTCGTATCCA AGCTTACGCT GAAAAGGGCG TTCAAGCGGA TCTGAAAGAT
CGTTACCAAG GTTTGGATAT CGGTGACATC ATCGGCGTGA CTGGTCAGTT GCACTTGTCT
GGTAAAGGCG ATCTGTACGT CAACATGGAA GAGTACCAAC TGCTGACTAA AGCACTACGT
CCTCTGCCAG AAAAATTCCA CGGCTTAACA GATCAAGAAA CCCGTTACCG CCAACGTTAT
GTTGACTTAA TCGTTAACGA AGAATCTCGT CAAGCCTTCG TAATGCGTTC AAAAGTGGTT
GCAGCTATCC GTAACTTCAT GATCAAAAAA GAGTTCATGG AAGTTGAAAC CCCAATGATG
CACGTGATCC CAGGCGGCGC TTCTGCCCGT CCATTTATCA CGCACCACAA TGCGCTGGAC
ATGCCTATGT ACCTGCGTAT CGCGCCAGAG TTATACCTCA AGCGTTTAGT GGTGGGTGGT
TTTGAGCGTG TGTTCGAAAT CAATCGTAAC TTCCGTAACG AAGGTCTGTC ACCACGTCAT
AACCCAGAAT TCACTATGAT GGAATTCTAT ATGGCCTATG CTGACTACCA AGATCTGATG
GACTTAACCG AAGAATTGTT AAGCTCAATT GCAATCGAAC TCTTAGGTAG CGCGCAAATG
CCATATGGCG AGCATACTGT TGATTTCGGT GGTCCTTATG CCCGTTTAAG CATGCTAGAA
GCGATTCAGA AGTACAATCC TGATAACGCG ACTATCCAGG CCATGACCTA CGAGCAAGTG
AAAGATCTTG AATTTATGCG TGAACTGGCT ATCAGCCTTG GCATCAAGAT TGAGAAGTTC
TGGACCTGTG GTCAGCTATT AGAAGAAATC TTCGGTGAAA CCGCTGAATG GCAGTTAATG
CAACCGACTT TCATCACTGG CTACCCAGCG GACATTTCGC CACTGGCACG TCGTAACGAT
GACAACCACT TTATTACCGA CCGTTTTGAA TTCTTCATCG GTGGCCGTGA AGTAGCTAAC
GGCTTCAGCG AGTTAAATGA TGCGCAGGAT CAAGACAGCC GCTTTAAAGC GCAGGTTGAT
GCCAAAGACG CGGGTGACGA TGAAGCCATG TTCTACGATG CGGACTACAT CACTGCACTG
GAACACGGTT TACCACCAAC AGCAGGTCAA GGTATCGGTA TCGACCGTTT AGTGATGCTA
TTCACTAACA CTCACACTAT CCGTGATGTG ATCCTATTCC CAGCGATGCG CCCACAGGCT
TAA
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| Protein sequence | MTEQVQDENK LIAERRAKLD SIRPNCSANA HPNTFRRTHK AAELQEKYGQ NTKEELEALG
FRTSIAGRIM AKRGPFLVIQ DVSGRIQAYA EKGVQADLKD RYQGLDIGDI IGVTGQLHLS
GKGDLYVNME EYQLLTKALR PLPEKFHGLT DQETRYRQRY VDLIVNEESR QAFVMRSKVV
AAIRNFMIKK EFMEVETPMM HVIPGGASAR PFITHHNALD MPMYLRIAPE LYLKRLVVGG
FERVFEINRN FRNEGLSPRH NPEFTMMEFY MAYADYQDLM DLTEELLSSI AIELLGSAQM
PYGEHTVDFG GPYARLSMLE AIQKYNPDNA TIQAMTYEQV KDLEFMRELA ISLGIKIEKF
WTCGQLLEEI FGETAEWQLM QPTFITGYPA DISPLARRND DNHFITDRFE FFIGGREVAN
GFSELNDAQD QDSRFKAQVD AKDAGDDEAM FYDADYITAL EHGLPPTAGQ GIGIDRLVML
FTNTHTIRDV ILFPAMRPQA
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