Gene SO_0977 details

Gene Information

• Locus tag: SO_0977
• ID: 1168821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1007685
• End bp: 1008182
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637342942
• Product: MarR family transcriptional regulator
• Protein accession: NP_716606
• Protein GI: 24372564
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAATA CTGAGTTATC TTCAGCGGTA AATACGCTAG AAAAGCCTGA AAATACCCTT 
GTTGACAATG TCTTATGTTT AGAGAACCAG GTTTGCTTTT CGCTTTACAG TGCTGCCAAT 
GCCATGGTTC GCGCTTATCG ACCTATGCTA GATAAGCTCG ATTTAACCTA TCCCCAATAT 
CTGGTGATGT TGGTGTTGTG GCAGGAGCAG GGGATTAGTG TTAAAACCTT AGGGGATAAA 
TTATTCCTCG ATTCGGGTAC ATTGACGCCC TTACTCAAAC GTTTAGAGTC AAAGGGATTG 
GTAAGTCGTG GTCGTAGCGA TCAGGATGAA AGAGTTAGGG TGCTCTGCTT GACGCCTGCT 
GGACAGGCGT TAAAGCGTGA GGCCAATGAG ATCCCGCATT TAATGCGCTG TAAAATCGGT 
GCGGAGCTTG ATGATCTTAA GGCTCTAAAA GCTATGTGTG ATAAAGCCTT AGCACAGTTG 
CATGCCAGTA TAGATTAG 

 

Protein sequence

MPNTELSSAV NTLEKPENTL VDNVLCLENQ VCFSLYSAAN AMVRAYRPML DKLDLTYPQY 
LVMLVLWQEQ GISVKTLGDK LFLDSGTLTP LLKRLESKGL VSRGRSDQDE RVRVLCLTPA 
GQALKREANE IPHLMRCKIG AELDDLKALK AMCDKALAQL HASID