| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0970 |
|---|
| Symbol | |
|---|
| ID | 1168814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1001534 |
|---|
| End bp | 1003324 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637342935 |
|---|
| Product | fumarate reductase flavoprotein subunit precursor |
|---|
| Protein accession | NP_716599 |
|---|
| Protein GI | 24372557 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01813] flavocytochrome c |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACAA GAAAGATTCA AAAAACAGCA CTAGCCATGC TGATCTCTGG CGCAATGGCA
GGCACAGCCT ATGCCGCTCC AGAAGTACTA GCCGATTTTC ACGGTGAAAT GGGTGGCTGC
GATAGCTGCC ACGTATCAGA CAAAGGTGGC GTGACTAACG ACAACCTGAC CCATGAGAAT
GGCCAATGTG TTAGCTGCCA CGGTGACTTA AAAGAACTGG CTGCAGCAGC GCCTAAAGAT
AAAGTTTCTC CGCACAAATC TCACTTAATT GGTGAAATCG CTTGTACGAG CTGCCACAAA
GGCCACGAAA AATCAGTAGC TTATTGTGAT GCTTGCCATA GCTTCGGCTT CGATATGCCA
TTTGGTGGCA AGTGGGAACG TAAGTTTGTA CCTGTTGATG CAGACAAAGC AGCACAAGAT
AAAGCCATTG CTGCTGGTGT GAAAGAAACC ACAGACGTTG TAATTATCGG CTCTGGTGGT
GCTGGTCTTG CCGCTGCCGT ATCTGCCCGT GATGCTGGCG CGAAAGTGAT TCTGTTAGAA
AAAGAACCTA TCCCAGGTGG TAACACTAAA CTGGCTGCCG GTGGTATGAA CGCCGCAGAA
ACTAAGCCAC AGGCTAAGTT AGGTATCGAA GATAAGAAAC AAATCATGAT CGACGACACT
ATGAAAGGTG GCCGCAACAT CAACGATCCT GAATTAGTTA AAGTACTGGC TAACAACTCT
TCAGACTCAA TCGATTGGTT AACCTCTATG GGTGCCGACA TGACTGACGT GGGTCGTATG
GGTGGCGCGA GCGTTAACCG TAGTCACCGT CCAACCGGTG GTGCAGGTGT TGGTGCTCAC
GTAGCACAAG TGCTGTGGGA CAACGCCGTT AAGCGTGGTA CTGATATTCG CTTAAACAGC
CGCGTTGTGC GCATCCTTGA AGATGCAAGC GGTAAAGTGA CCGGCGTTTT AGTGAAAGGT
GAATACACAG GTTACTATGT GATCAAAGCC GATGCAGTAG TCATTGCAGC AGGTGGTTTT
GCGAAAAACA ACGAACGTGT TTCTAAATAC GATCCTAAGT TAAAAGGCTT TAAAGCGACC
AACCACCCAG GTGCGACGGG TGACGGCTTA GACGTAGCTC TACAAGCGGG CGCAGCAACA
CGTGACTTAG AATACATCCA AGCTCACCCA ACTTACTCTC CAGCGGGTGG CGTGATGATC
ACCGAGGCAG TACGTGGTAA CGGTGCAATC GTGGTGAACC GTGAAGGTAA TCGTTTTATG
AACGAAATCA CCACCCGTGA TAAAGCGTCT GCGGCGATTC TGCAACAAAA AGGTGAAAGC
GCTTACCTAG TATTCGATGA CTCTATCCGT AAGAGCTTGA AGGCCATCGA AGGTTATGTT
CACCTGAACA TTGTAAAAGA AGGTAAAACC ATCGAAGAGT TAGCGAAACA AATCGATGTA
CCTGCAGCTG AATTGGCAAA AACAGTAACA GCCTACAACG GTTTCGTTAA ATCAGGTAAA
GATGCTCAAT TTGAACGTCC TGATTTACCA CGTGAATTAG TGGTAGCTCC TTTCTACGCC
TTAGAAATTG CACCAGCGGT TCACCACACT ATGGGTGGTC TGGTGATTGA TACTAAAGCC
GAAGTGAAGA GTGAGAAAAC CGGTAAACCT ATCACTGGTT TATACGCTGC AGGCGAAGTG
ACTGGTGGTG TTCACGGTGC TAACCGTTTA GGTGGTAACG CTATCTCTGA TATCGTCACC
TACGGCCGTA TCGCGGGTGC ATCTGCCGCT AAATTCGCTA AAGATAATTA A
|
|---|
| Protein sequence | MFTRKIQKTA LAMLISGAMA GTAYAAPEVL ADFHGEMGGC DSCHVSDKGG VTNDNLTHEN
GQCVSCHGDL KELAAAAPKD KVSPHKSHLI GEIACTSCHK GHEKSVAYCD ACHSFGFDMP
FGGKWERKFV PVDADKAAQD KAIAAGVKET TDVVIIGSGG AGLAAAVSAR DAGAKVILLE
KEPIPGGNTK LAAGGMNAAE TKPQAKLGIE DKKQIMIDDT MKGGRNINDP ELVKVLANNS
SDSIDWLTSM GADMTDVGRM GGASVNRSHR PTGGAGVGAH VAQVLWDNAV KRGTDIRLNS
RVVRILEDAS GKVTGVLVKG EYTGYYVIKA DAVVIAAGGF AKNNERVSKY DPKLKGFKAT
NHPGATGDGL DVALQAGAAT RDLEYIQAHP TYSPAGGVMI TEAVRGNGAI VVNREGNRFM
NEITTRDKAS AAILQQKGES AYLVFDDSIR KSLKAIEGYV HLNIVKEGKT IEELAKQIDV
PAAELAKTVT AYNGFVKSGK DAQFERPDLP RELVVAPFYA LEIAPAVHHT MGGLVIDTKA
EVKSEKTGKP ITGLYAAGEV TGGVHGANRL GGNAISDIVT YGRIAGASAA KFAKDN
|
|---|
| |