Gene SO_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0968 
SymbolldhA 
ID1168813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1000301 
End bp1001290 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content47% 
IMG OID637342934 
ProductD-lactate dehydrogenase 
Protein accessionNP_716597 
Protein GI24372555 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG GATTTTTTAG CGCAAAACAC TACGACATGC AGCATTTTAA CCGTACGAAT 
GCCGCATTTG ATGCGCAAAT TGAGTATTTC GATTATCGTC TCTGCATGCA AACGGTAAAA 
CTTGCCGAAG GTTTCGAGGT CGTTTGCGCC TTTGTTAACG ACTCCCTCTG TGAAGAAGTG 
CTGGTCGAGC TTGCCAAGGG CGGCACTAAA ATCATTGCCA TGCGCTGCGC AGGCTTTAAC 
AATGTCGACT TAGTCGCCGC TAAACGTTTA GGCATGCAAG TCGTCAACGT ACCCGCTTAT 
TCCCCCGAAT CGGTAGCCGA GCATACCGTT GCCTTAATGC TCACGTTGAA CCGCAAGATC 
CATAAAGCCT ACCAACGTAC CCGTGATGCG AACTTTTCCC TCGAAGGCTT AGTCGGTTTC 
AATATGTTTG GTAAAACCGT TGGTGTGATA GGCACGGGAA AAATTGGAGT AGCAACCATT 
AAGGTGCTGC TCGGTTTTGG CTGTAAAGTG ATTGCCTTTG ACCCCTACCC TAATCCAGCG 
GTAGAAGCGC TCGATGTGGA ATATCAGGAT CTGGATACCA TTTACGCCAC CAGCGACATT 
ATCAGCCTGC ATTGCCCGTT AACACCCGAT AACCATCATC TGCTTAATAA AGACAGTTTT 
GCCAAGATGA AACCCGGCGT TATGGTGATC AACACCAGCC GCGGCGGCTT ACTCAATGCC 
TTTGATGCAA TGGAAGCCTT AAAACTCGGG CAAATTGGTG CATTAGGGCT AGACGTATAT 
GAAAACGAAA AAGAACTCTT TTTCGAAGAC AAATCTAACC AAATCATTCA AGACGATGTT 
TTCCGTCGCC TATCAGCCTG CCATAACGTG ATTTTCACCG GTCACCAAGC CTTCCTCACC 
GAAGAAGCAT TAGGCGCGAT TGCCAACACC ACCCTAAGTA ATGTGCAAGC AGTACTCGCG 
GGTAAACGTT GTGGTAATGA ACTGTTTTAA
 
Protein sequence
MRIGFFSAKH YDMQHFNRTN AAFDAQIEYF DYRLCMQTVK LAEGFEVVCA FVNDSLCEEV 
LVELAKGGTK IIAMRCAGFN NVDLVAAKRL GMQVVNVPAY SPESVAEHTV ALMLTLNRKI 
HKAYQRTRDA NFSLEGLVGF NMFGKTVGVI GTGKIGVATI KVLLGFGCKV IAFDPYPNPA 
VEALDVEYQD LDTIYATSDI ISLHCPLTPD NHHLLNKDSF AKMKPGVMVI NTSRGGLLNA 
FDAMEALKLG QIGALGLDVY ENEKELFFED KSNQIIQDDV FRRLSACHNV IFTGHQAFLT 
EEALGAIANT TLSNVQAVLA GKRCGNELF