| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0959 |
|---|
| Symbol | pepA-1 |
|---|
| ID | 1168804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 993944 |
|---|
| End bp | 995479 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637342925 |
|---|
| Product | cytosol aminopeptidase |
|---|
| Protein accession | NP_716588 |
|---|
| Protein GI | 24372546 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AGAATAAATT TTTGTTAAGC GTTATGGCTC TGGCGTGCCT TAACTCTCTC
AATGCTAACG CCGAAATCTT TAGTTTTGAC ACTCGTAATT CACTTAATTC CGATACCTTA
GTACTGTTCC ACAGTGCTGA TTCAACAACC TATAGTCTCG ATTTTTTGCC CCAGTCGACC
CAAGATCAAC TCAATCTTGC CGTGGCCGAC AATAGTTTTT CGGGTAAACG CGGCGAAGTA
TTAGAGATTT TAGTACCGAG CGAAATCGAT GCCAAGCGTG TGTTACTCGT TGGGATTGGC
GATGCCAAAA CCTTAACGCC AGGTGAAATC AACGCCTTAG GTGGCAACAT TGCCGCCAAA
CTTGAAACCG TGCCGCAAGC CACGGTACGA GTGCTGACCC AAGGCCTCAA TAACGCGCCT
CTGTTTGGCT CAGAACTGGC CCACGGCATC GAGCTGCGCA GCTATCGCTA CACCCAATTT
AAAGCGAGCA ATCGCGTTGA AAAAAACTAT CAAATCGGCG TTGATGATTT AAGCCTCAAC
CAAAAACACC ATAAGAATCT GCAAGCCGTT GAAGCAGGTG TGTTTTTGGC GCGGGATCTG
ACCAATGCAC CTGCGGGAAA CATGTATCCC GAAAGCTTTG CTAATGAGGC TCGTAAGCTC
AAATCCTTGG GCGTTAAAGT CACCGTACTG GAAGCGAAAG ATATTGAACG CCTAAACCTT
GGCGCCTTAG CCGCAGTAGG TAAAGGCAGC GAGCGCCCAC CTAAGCTGGT TGTCGCCCAC
TGGCCCGGCA GTAAAGAGGC GCCAATCGCC CTCGTCGGCA AAGGTATAAC CTTCGACTCT
GGCGGTTACA ACATAAAAGC GACGGGCACC TCCATCGCGC GGATGAAGTC CGATATGGCG
GGCGCAGCAA CTGTGCTTGG CACCGTAAAA GCCATGGCGA TTCAAAAGGC ACCAGTAAAC
CTGGTCGCCA TTATGCCTAT GGCTGAAAAT ATGGTGTCGG GCCATGCGAT GATCCCTGGC
GATGTGATCA CCACGGCGCA GGGACTGACT GTTGAAGTAC TCAACACCGA TGCCGAAGGC
CGTTTAGTGT TAGCCGATGG CCTATGGTAT GCCCGTGAAA ACTACCGGCC ATCGGTAATC
ATCGATGTTG CCACCCTTAC AGGCTCAAAA GTCAGTGCGC TAGGCACGGT TTATGCGGGA
TTATTTACCG ATTCAGAGCC GCTAGTGCAG CAGCTCACCT TTGCAGGCCA GCAGGTGGGT
GAAAAAGTTT GGCGCTTGCC GTTAGATCAG GCCTACGACG ATGAACTCAA ATCCACCATC
GCTGATTTGA AGAATACCGG TAAGGAAGGC AGCGCGGGAG CATCTGCGGC AGCTATGTTC
CTTAAACGCT TTGCGGGCGA TCAGCCTTGG GCGCATCTTG ATATTGCTGG TCATGCCCTC
ACCGCAACTG ATACCGCAGT AGTCCCAGCA GGTGCAACAG GTTATGGCGT GCGTTTACTT
AGCACTTGGC TAACCCAGCC CAAAGCGCAA AACTAG
|
|---|
| Protein sequence | MKNKNKFLLS VMALACLNSL NANAEIFSFD TRNSLNSDTL VLFHSADSTT YSLDFLPQST
QDQLNLAVAD NSFSGKRGEV LEILVPSEID AKRVLLVGIG DAKTLTPGEI NALGGNIAAK
LETVPQATVR VLTQGLNNAP LFGSELAHGI ELRSYRYTQF KASNRVEKNY QIGVDDLSLN
QKHHKNLQAV EAGVFLARDL TNAPAGNMYP ESFANEARKL KSLGVKVTVL EAKDIERLNL
GALAAVGKGS ERPPKLVVAH WPGSKEAPIA LVGKGITFDS GGYNIKATGT SIARMKSDMA
GAATVLGTVK AMAIQKAPVN LVAIMPMAEN MVSGHAMIPG DVITTAQGLT VEVLNTDAEG
RLVLADGLWY ARENYRPSVI IDVATLTGSK VSALGTVYAG LFTDSEPLVQ QLTFAGQQVG
EKVWRLPLDQ AYDDELKSTI ADLKNTGKEG SAGASAAAMF LKRFAGDQPW AHLDIAGHAL
TATDTAVVPA GATGYGVRLL STWLTQPKAQ N
|
|---|
| |