| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0956 |
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| Symbol | ahpF |
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| ID | 1168802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 991215 |
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| End bp | 992798 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342923 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | NP_716585 |
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| Protein GI | 24372543 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATG CGAATTTAAA AAATCAACTG CAAACCTATC TGCAAAACCT CAAGAGACCA
GTTGAACTTG TCGTGTCAGC AGATGAAAGC AAGAAGTCTC AAGAATTAAA AAGCTTAGTC
AATGACATCG TTAGCCTTTC AACGTTCGTG AGCCTGAAAG AAGCTCAAGG CCAACGCACG
CCAGCGATGA CAGTGGTTAA CCCTGCACTC AATACTCAGA TTAGCTTTGC TGGTCTGCCT
ATGGGTCACG AATTTACCTC ACTGGTGTTA GCCTTGCTGC ACAGCGGTGG ACACCCGATC
AAACTCAGCG ATGACATCAT CGAGCAGATC CGTAATCTGC CCGGCAAATA TGAGTTTGAA
ACCTATGTGT CACTCACCTG CCAAAACTGC CCTGATGTAG TTCAAGCACT CAATATGATG
GCTGCCATTA ATCCGAACAT CACCAACGTG ATGATCGACG GCGCCCTGTT CCAAGATGAA
GTCGCCAGCC GCAACATCAT GGCCGTACCT TCTGTGTACT TAAACGGCGA GGTGTTTGCC
GCAGGTCGCA TCAGCATCGG TGAGATCTTA AATAAACTCG ATACTGGCGC TGCCAGCCGT
AAAGCCGAAG AGCTTAGCCA AAAAGCCCCA TATGAAGTCT TAGTCGTTGG CGGCGGCCCT
GCTGGCGCTG CGGCAGCAAT TTACGCTGCC CGTAAAGGCC TGCGTACCGG TATTGTTGCC
GACAAATTCG GTGGTCAAGT GGCTGAAACC GTTGGTATCG AAAACTTTAT TTCGGTAAAA
GCGACTGAAG GTCCAAAACT GGTGGCAAAC CTTGAAGCCC ATGTGCGTGA CTATGAAGTC
GACATCATGG ATAACCAAAA GGCAGTCAAA CTGGCGAGCG ATGGCTTATT CGAACTCGAA
TTAGCAAGCG GCGCCAAACT GCGTAGCCGT ACTGTATTAC TCGCAACCGG TGCTCGCTGG
CGCGAAATGA ACGTCCCCGG CGAGAAAGAA TACCGTGGTA AAGGCGTTGC CTATTGCCCA
CATTGTGACG GCCCATTATT TAAAGGCAAA CGTGTAGCGG TTATCGGTGG CGGTAACTCA
GGTATCGAAG CAGCCATCGA CTTAGCCAAT ATCGTTGAGC ATGTGACCGT ACTCGAGTTT
GATAGCAAAC TGCGCGCTGA CGATGTACTG CAACGTAAAG CGGCCTCTAT GGGTAACATC
AAAATCATTA CCCAAGCGAT GACCACTGAA GTGACTGGTG ATGGTACCCG TGTTAACGGC
CTAAACTACA CCGACCGCGC AACAGGTGAA AGTCATCATA TCGCGCTGGC AGGGATCTTC
GTACAGATCG GTTTAGTGCC CAATGCCGAA TGGTTAAAAG GCACAGTGGA TTTGACTCCT
CGCGGCGAAA TCATTGTCGA TGAGCGCGGC CAAACCTCAG TACCTGGCGT ATTTGCCGCT
GGTGACGTGA CCAACTCACC TTACAAGCAA ATCATCATTG CTATGGGTAG TGGTGCCAAT
GCCTCACTGG GTGCATTTGA TTACTTAATT CGCCATAGCG ATGATAGTAC CGAAACCAAA
ACCACAGACA CTAAAGCGGC TTAA
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| Protein sequence | MLDANLKNQL QTYLQNLKRP VELVVSADES KKSQELKSLV NDIVSLSTFV SLKEAQGQRT
PAMTVVNPAL NTQISFAGLP MGHEFTSLVL ALLHSGGHPI KLSDDIIEQI RNLPGKYEFE
TYVSLTCQNC PDVVQALNMM AAINPNITNV MIDGALFQDE VASRNIMAVP SVYLNGEVFA
AGRISIGEIL NKLDTGAASR KAEELSQKAP YEVLVVGGGP AGAAAAIYAA RKGLRTGIVA
DKFGGQVAET VGIENFISVK ATEGPKLVAN LEAHVRDYEV DIMDNQKAVK LASDGLFELE
LASGAKLRSR TVLLATGARW REMNVPGEKE YRGKGVAYCP HCDGPLFKGK RVAVIGGGNS
GIEAAIDLAN IVEHVTVLEF DSKLRADDVL QRKAASMGNI KIITQAMTTE VTGDGTRVNG
LNYTDRATGE SHHIALAGIF VQIGLVPNAE WLKGTVDLTP RGEIIVDERG QTSVPGVFAA
GDVTNSPYKQ IIIAMGSGAN ASLGAFDYLI RHSDDSTETK TTDTKAA
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