Gene SO_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0948 
Symbol 
ID1168794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp983738 
End bp984400 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID637342915 
Producthypothetical protein 
Protein accessionNP_716577 
Protein GI24372535 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCA GTACCGACGG CGTGATTTTA GGCGCGTGGT CCCCACTGTC ACAGGCTCAG 
CAAATTTTAG ATATTGGCGC AGGAAGTGGG TTATTGAGTT TAATGGCGGC GCAGCGAAGC 
CTTGGGCGGA TCACCGCAGT GGAGCTTGAG GAAAAAGCCG CCGCCGCTTG CCTATACAAT 
ATGGTGCAAA GTCCTTGGGC GGACAGGCTG AGTGTTATCC ACTGTGATAT TCAAGATTTT 
TGCCAGCAAA CTCAGTATCA CGGCTTTTTT GACCATATCA TCTGTAATCC ACCTTACTTC 
GAGCACGGCC CCCAAGCGAA CGACAGTCAC AGAGCCATGG CACGTCATAC CAACACATTA 
GGATTTGCGC CATTGCTGGA CGCCATAATT CAATGCCTTA CGCCTCAAGG CTATGCCAGT 
CTAATCCTCC CCAGCCAAAG CATGCCGCGC TTTAAGGCCT GCCTAACTTC GTCCAAGCTC 
CATCTCACAG AAGAAGTTCT GGTTAAAAGC GTGGAGAATA AAGCCGCAAA CAGAGTACTA 
CTTCTATTGA GTAAAAATCG ACAAAGTGAT TATCGACAAA GTGAACTCAC CATCCGAGGC 
ATTGATGGGC TTTACACGAA ACACATGATT GAGCTTACAA GAGATTTTTA CCTTAAATTA 
TAA
 
Protein sequence
MPVSTDGVIL GAWSPLSQAQ QILDIGAGSG LLSLMAAQRS LGRITAVELE EKAAAACLYN 
MVQSPWADRL SVIHCDIQDF CQQTQYHGFF DHIICNPPYF EHGPQANDSH RAMARHTNTL 
GFAPLLDAII QCLTPQGYAS LILPSQSMPR FKACLTSSKL HLTEEVLVKS VENKAANRVL 
LLLSKNRQSD YRQSELTIRG IDGLYTKHMI ELTRDFYLKL