| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0947 |
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| Symbol | srmB |
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| ID | 1168793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 982197 |
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| End bp | 983459 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342914 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | NP_716576 |
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| Protein GI | 24372534 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG AAGATTTCCA GCTTGACCCT AGCTTATTAG AGTCACTTAA AGCCATGGGG
CACCTTTCGC CCACCACAAT CCAACAAGAA ACGCTGCCTC ACGCCTTAGA GCAAAGGGAC
ATTTTAGCGC GCGCCCCGAC GGGTACAGGT AAAACCGCCA GTTTCTTATT ACCCGCGCTA
CAACATTTAA TCGACTTTCC CCGTCGTTAC TCGGGTCAAG CACGCGTGTT AATTCTCACC
CCAACCCGTG AGTTGGCGAG CCAAATTCAC CGCTATGCCT GCCATTTAGC CACTGACCAA
GGGCTGAATA TCGCCATTAT TACTGGCGGC GTGCCCTATG CACCTCAAGA GGAAGCGCTA
AAGGGCAATA TCGATATTCT GGTCGCGACA CCCGGTCGCC TGATGGAATA TTTAGATAAA
GGCAAATTCA GTGCTGAATC CGTTGACATT CTGATCATCG ACGAAGCTGA CCGTATGCTG
GATATGGGAT TCTCGGCGGT AGTTAAAGCC ATTGCGCTCG AAGCCCAAGG CCGCAAGCAG
AACATGCTGT TTTCTGCCAC CCTTGAAGGC AGTGGTGTTA TCCGCTTTGC CCGTGAAGTC
CTTAACGATC CGATTGAAAT CGACGTTGAC GCACCACGCA AAGAGAAGGC AAAGATCCAC
CAATGGATCC ACCTCGCCGA TGACAAAGAC CATAAGTTTG CGCTGCTGTG CCATCTGTTA
AAGCAAGAAG ATGTGAAACG CGCCATCGTG TTCGTCAAAA CCCGCGATGT AGTCTCTAGC
CTCGAAGGCC AGTTACTTCA AGCTGGTATC CCGTGCGCCT TTATGCGCGG GGATATGGAA
CAGAAGAAAC GTTTCCAAGC TCTGAGCCGT TTCACTAAGG GAGAAGTGAA TGTACTGTTG
GCGACTGATG TTGCAGCCCG TGGTATCGAT ATCGATGATA TCAGCCATGT GATTAACTTC
GATATGCCAC GTTCTGCCGA TACCTATATC CACCGCATTG GTCGTACTGG CCGCGCAGGA
GCAAAGGGCA CTGCGATTTC ACTGGCTGAA GCCCATGATA TGCGCATCGT TGGTAAGATT
GAGCGCTATA TTGAGCAACC GCTTAAGCGC CGCATCATTG AAGAGCTTCG CCCTAAACAT
AAAGAGGCGC GAGTACCGAC GAAGAAAAAG GCGAAAGTAA AGGCCAAAGA AGCGGCGAAA
AAAACCAGCA AAAAAGAGGC TGCGAAAAAG GCCAGCAAAA TCGCCCGCAA AAAACAGTCA
TAA
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| Protein sequence | MQFEDFQLDP SLLESLKAMG HLSPTTIQQE TLPHALEQRD ILARAPTGTG KTASFLLPAL
QHLIDFPRRY SGQARVLILT PTRELASQIH RYACHLATDQ GLNIAIITGG VPYAPQEEAL
KGNIDILVAT PGRLMEYLDK GKFSAESVDI LIIDEADRML DMGFSAVVKA IALEAQGRKQ
NMLFSATLEG SGVIRFAREV LNDPIEIDVD APRKEKAKIH QWIHLADDKD HKFALLCHLL
KQEDVKRAIV FVKTRDVVSS LEGQLLQAGI PCAFMRGDME QKKRFQALSR FTKGEVNVLL
ATDVAARGID IDDISHVINF DMPRSADTYI HRIGRTGRAG AKGTAISLAE AHDMRIVGKI
ERYIEQPLKR RIIEELRPKH KEARVPTKKK AKVKAKEAAK KTSKKEAAKK ASKIARKKQS
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