| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0945 |
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| Symbol | |
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| ID | 1168791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 977233 |
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| End bp | 980436 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342912 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_716574 |
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| Protein GI | 24372532 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGC AAAAAGGGAT CATAGCTTGG TTTGCCCACA ATAGCGTAGC GGCCAACTTG
TTAATGTGGA TAGTGTTAAT CGGCGGGCTC TTTAGCGCAG TATTAATTAA TAAAGAAGTA
TATCCACCAT TTGAACTCAA TCTACTTAAT ATCTCCGTGG CTTATCCTGG GGCTGCCCCT
CAGGAAATCG AAGAAGGCAT CAACATCAAG ATTGAAGAAG CCATCCAAGA TATTAATGGG
ATTAAAAAAG TGACTTCGGT CGCCCGTGAG GGAATAGGCA CAATCAGCAT AGAGGTAGAA
GATGGTTACG ATGTTCAGAA CCTGTTAGAT GAAGCTAAAC TACGCTTAGA TGCAATCTCT
ACCTTCCCTG TAAATATTGA AAAGCCGGAA ATTTTTAAGG TTGAGCCCGA AAATTTTGTG
CTGTGGGTCT CTATCTACGG TGAAATGTCA CTGCACGATA TGAAGGAATT GGCTAAATCA
GTACGTGATG ATTTGACCCA GCTCCCCGCC GTTACCCGTG CGAAAGTCAC GGGGGTGCGC
GATTATGAAA TCGGCATCGA AGTCTCAGAA GATAAACTGC GTGAATACGG CTTAACCTTC
TCGCAAGTCG CAACAGCGGT ACAAAACTCC TCCATCGATT TACCCGGCGG TTCAATTCGC
GCTGAGGATG GTGACATTCT GCTGCGCACT AAAGGTCAAG CCTATACGGG CGATGATTTT
GCCAATATCG TCGTCACTAC CCGTGCCGAC GGTAGCCGCG TGATGTTGCC GCAAGTTGCC
ACCATTAAGG ACGATTTTGA AGAACGCTTA GAGTACACCC GCTTTAATGG AAAACCCGCT
GCCATTATTG AAGTCACCAG CGTCAACGAT CAAAACGCCT TAGAAATTGC TGCGCAGGTT
AAACAATATG TAGAGGATCG CCGCGCGACA TTACCAGCCA ATGCTAAGCT AGACACTTGG
GGGGATATGA CTCACTACCT CAAAGATCGC CTCAATATGA TGTTATCCAA CATGTTTTAT
GGCGCCCTGC TGGTGTTTAT TATCCTCGCC TTATTTCTGG ACTTAAGGCT TGCCTTTTGG
GTAATGATGG GGATACCCGT GTGCTTCCTT GGCACTATGT TGCTGATGCC TCTCGAACCT
TTTTCGATGA CCATCAACAT GATGACCTTA TTTGCGTTTA TTCTGGTACT CGGGATTGTG
GTCGACGATG CCATAGTGAT TGGCGAGAGT GCCTACGATG AAGTTGAGCG TCATGGGCAC
TCGATTGATA ATGTGATCCA CGGAGCACAA AAGGTGGCAA TGCCAGCGAC CTTCGGAGTG
TTAACCACTA TCGCCGCCTT TATACCTATG TTGTTGGTAT CTGGACCTAT GGGGGTTATT
TGGAAATCCA TCGGCATGAT TGTCATCTTG TGTCTGGCAT TTTCACTGGT GGAATCTAAA
TTTATCCTAC CGGCGCACTT GGCCCATATG AAGTTTAAAA AACCGGGGGA GTCGACCGGT
TTCTTTGGAC GCTTTAGAGA AAAATTTAAC AATCGCGTAC AGCACTTTAT TCACCACAGT
TACCGTAACT TCCTCGAACG CTGTATTCGT CAACGCTATA ACGTACTGGC GATTTTTATC
GGTGTATTAA TCCTCTCTAT AGCCTTAGTG CTCAGCGGAA AAGTACGTTG GGTATTCTTT
CCCAATCTCG CCTCGGATTT TATCCAAGTA CAATTGGAAA TGGATGAAGG CAGCTCTGAG
CAAAACACTC TCAAGGTGAT TCAGGATATT GAAGATGCCT TATATAAAAT GAACGCCGAT
ATTGCCCAAA AATATGGCTA TGAGGTGGTG AAACATAGTT TTATTAATAT GGACTCTCGC
ACCTCGGCCT TTATTTTTGC AGAGCTTGTC AAAGGTGAAG CGAGGGATAT AGATGCCGAT
ACTATTTCTG CAGCTTGGCG CGCGCAACTG CCCGAACTCC TATCGGTAAA AAAACTCGAT
CTTAACGGTG GTCGAAACAT GGGTAGCGGC GGCGATATAT CCTTTAGATT ATCATCTAAC
TCGTTGGATG AATTAGCGGC GGCTTCGAAG GAGATCAAAC AAAAACTGGC ATCCTATGAA
GGAATATACG ACATTGCCGA TAATTATTCA TCGGGTAGCA GTGAAATCCG CCTGAAAATT
CGCCCCGAAG CCGAAGCGTT AGGGTTAACC CTTTCTGATC TTGCCCGCCA AGTACGTTAT
GGCTTCTATG GTTATGAAGC TCAACGAATT TTGCGCAGTA AAGAAGAAGT CAAAGTGATG
GTGCGTTACC CATTAGAACA ACGCCGAACC CTTGGTCACC TTGAAAACAT GTTGATCCGC
ACGCCTCAAG GCACTGCAGT ACCCTTCTCT ACCGTCGCAG AGATTGAAAA GGGCGAGTCC
TTTGCCTCAA TCACCCGTGT AGATGGTAAA CGGGCAATTA GCATCACTGC TAACGCGAAC
AAAAATATCG TTGAACCCTC TAAAGTGGTC AATGAAATCC AAGAGACTTA CTTACCCCAA
TTACAAGCCA AGTACCCTAG CATTCAAACA GCCCTCGATG GCGGCAGTTT AGATGAGCAG
AATGCCTTGG TTGGGTTAAT TCAAGGCTTT TTCTTTGCCC TGTTTACTAT TTATGCCTTG
ATGGCCGTGC CGCTCAAATC CTATAGCCAG CCGTTAATTA TTATGTCAGT AATTCCCTTT
GGTATTATTG GCGCCATTTT TGGCCACCTA ATCCAAGGCC TATCGATTAG CGTGCTTAGC
CTTTGTGGGA TTGTGGCGCT AGCTGGGGTC GTCGTAAATG ACTCCTTGAT TTTGGTCGAC
TTTGTTAACC GAGCGCGGGA GCAAGGCCAA TCAATAAGAC AAGCAGCGGT AGATTCGGGT
TGTTATCGTT TTAGGGCGAT TATCTTAACC TCACTCACAA CCTTTGTAGG CCTCGCACCG
ATCATCCTTG AGCGCAGCCT GCAAGCGCAA GTGGTGATCC CCATGGCGAC ATCGCTTGCC
TTCGGTATCC TATTCTCAAC AGTCGTCACC TTAATCCTAG TGCCGCTGCT GTATATCATA
CTCGATGATG CTAAACGCCT TGGTAGCCGC CTCTACCATT GGTGGTGGCG CCCGAAAAAC
ACGCAGGAGA TGCCGTTGCA TACCAATGAA ACTCATAGAG TATCCTTGGA TGCCGTAAAT
GAACCTGACT ATAAGCGGGA TTAG
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| Protein sequence | MDTQKGIIAW FAHNSVAANL LMWIVLIGGL FSAVLINKEV YPPFELNLLN ISVAYPGAAP
QEIEEGINIK IEEAIQDING IKKVTSVARE GIGTISIEVE DGYDVQNLLD EAKLRLDAIS
TFPVNIEKPE IFKVEPENFV LWVSIYGEMS LHDMKELAKS VRDDLTQLPA VTRAKVTGVR
DYEIGIEVSE DKLREYGLTF SQVATAVQNS SIDLPGGSIR AEDGDILLRT KGQAYTGDDF
ANIVVTTRAD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVTSVND QNALEIAAQV
KQYVEDRRAT LPANAKLDTW GDMTHYLKDR LNMMLSNMFY GALLVFIILA LFLDLRLAFW
VMMGIPVCFL GTMLLMPLEP FSMTINMMTL FAFILVLGIV VDDAIVIGES AYDEVERHGH
SIDNVIHGAQ KVAMPATFGV LTTIAAFIPM LLVSGPMGVI WKSIGMIVIL CLAFSLVESK
FILPAHLAHM KFKKPGESTG FFGRFREKFN NRVQHFIHHS YRNFLERCIR QRYNVLAIFI
GVLILSIALV LSGKVRWVFF PNLASDFIQV QLEMDEGSSE QNTLKVIQDI EDALYKMNAD
IAQKYGYEVV KHSFINMDSR TSAFIFAELV KGEARDIDAD TISAAWRAQL PELLSVKKLD
LNGGRNMGSG GDISFRLSSN SLDELAAASK EIKQKLASYE GIYDIADNYS SGSSEIRLKI
RPEAEALGLT LSDLARQVRY GFYGYEAQRI LRSKEEVKVM VRYPLEQRRT LGHLENMLIR
TPQGTAVPFS TVAEIEKGES FASITRVDGK RAISITANAN KNIVEPSKVV NEIQETYLPQ
LQAKYPSIQT ALDGGSLDEQ NALVGLIQGF FFALFTIYAL MAVPLKSYSQ PLIIMSVIPF
GIIGAIFGHL IQGLSISVLS LCGIVALAGV VVNDSLILVD FVNRAREQGQ SIRQAAVDSG
CYRFRAIILT SLTTFVGLAP IILERSLQAQ VVIPMATSLA FGILFSTVVT LILVPLLYII
LDDAKRLGSR LYHWWWRPKN TQEMPLHTNE THRVSLDAVN EPDYKRD
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