| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0935 |
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| Symbol | nhaD |
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| ID | 1168781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 966474 |
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| End bp | 967904 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342902 |
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| Product | Na+/H+ antiporter |
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| Protein accession | NP_716564 |
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| Protein GI | 24372522 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAAGCC TATGCTGCGT GGCAATATTG AGCGGATTCT CACCCGCAGT TTGGGCGATG
ACCGAAGGAG GTGAACGGCT CGATTTAACC GCTGCAACAG TGGGTTATAT TGCCGTGTGT
GTTTTTGTTC TCGCCTATTT ATTGGTGATG GCTGAAGAGA CGCTGCATCT GCGTAAATCC
AAACCTGTGT TGGTCGCAGC AGGCATTATT TGGGGCATGA TAGGTTTTGT GTATGTGCAA
AATGGTATGT CAGAGGTTTC TGAGACGGCC TTTAAGCACA ATTTATTAGA ATATGCCGAG
TTATTACTCT TCTTATTGGT GGCGATGACC TATATCAATG CCATGGAAGA ACGTAATTTA
TTCGATGCCA TCCGCGGCTG GTTAGTGGGA CGTGGTTTTA GCTTGCGAAC CGTTTTTTGG
CTAACTGGCT TTATGGCTTT CTTCATTTCG CCCGTGGCTG ATAACTTAAC AACGGCGTTA
TTAATGTGCG CTGTGGTGAT GAAAGTTGGG GCTGGACAGC GAAAATTCAT TACACTCGCT
TGTATTAATA TTGTGGTGGC GGCCAATGCG GGCGGTACAT TTAGTCCCTT TGGAGATATC
ACTACCTTGA TGGTTTGGCA AAAGGGGTTA GTGCATTTTG CAGATTTCTT CTATCTGTTT
ATTCCTGCGC TAGTCAATTT TGCCTTACCT GCCGCGATCA TGAGTATATT TATTCCGCAC
TATGTGCCTC AGCCTGAAAA AGAGCAGGTT TACACTAAAC CTGGAGCTAA ACGTATCGTC
GCACTCTTCT TGTTGACAAT TGCTACCGCG GTGTGTGCTC ACTCCTTCCT TGGAATGCCG
CCCGTGCTTG GGATGATGAC AGGTCTTGGT TTCTTACAAT TCTTTGGTTA TTACCTGCGT
AAGACCTTTG ATCGCTCCGT TGCCCGTGAA CGTGCCAAGG CAGAATTGCG TCAGGATGAG
CAACGTCTTC TGCAGCTTGG TAGTGTGGTG CCCTTCGATG TGTTTAGCCG GATCTCCCGC
GCTGAATGGG ATACCTTGCT GTTCTTCTAC GGTGTGGTTT TGTGTGTTGG CGGCCTTGGT
TTTATGGGGT ATTTGAGCTT AGTGTCTGAG GCGCTATATT CCAACTGGGA TGCGACCTAT
GCCAACGTGG CTATCGGTCT GTTGTCTTCG GTTGTTGATA ATATCCCGGT GATGTTTGCT
GTGTTGACGA TGAACCCAGA GATGGCCCTA GGCCAATGGT TACTGGTAAC GTTAACCGCA
GGGGTAGGGG GCAGTTTATT GTCAATTGGC AGTGCTGCAG GAGTTGCGTT AATGGGACAA
GCGAGGGGGA TTTACACCTT TGGTGCCCAT TTGCGTTGGA CACCTGTCAT TGCACTGGGT
TATGTCGCGA GCATTTTAGT ACATATGTGG CTCAATGCTG CAATGTTCTA A
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| Protein sequence | MLSLCCVAIL SGFSPAVWAM TEGGERLDLT AATVGYIAVC VFVLAYLLVM AEETLHLRKS
KPVLVAAGII WGMIGFVYVQ NGMSEVSETA FKHNLLEYAE LLLFLLVAMT YINAMEERNL
FDAIRGWLVG RGFSLRTVFW LTGFMAFFIS PVADNLTTAL LMCAVVMKVG AGQRKFITLA
CINIVVAANA GGTFSPFGDI TTLMVWQKGL VHFADFFYLF IPALVNFALP AAIMSIFIPH
YVPQPEKEQV YTKPGAKRIV ALFLLTIATA VCAHSFLGMP PVLGMMTGLG FLQFFGYYLR
KTFDRSVARE RAKAELRQDE QRLLQLGSVV PFDVFSRISR AEWDTLLFFY GVVLCVGGLG
FMGYLSLVSE ALYSNWDATY ANVAIGLLSS VVDNIPVMFA VLTMNPEMAL GQWLLVTLTA
GVGGSLLSIG SAAGVALMGQ ARGIYTFGAH LRWTPVIALG YVASILVHMW LNAAMF
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