Gene SO_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0931 
Symbolepd 
ID1168777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp961739 
End bp962755 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content49% 
IMG OID637342898 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionNP_716560 
Protein GI24372518 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGAG TCGCAATCAA TGGTTATGGT CGTATTGGCC GCTCAATCCT TCGCGCTTTA 
TATGAGTCAG GAAAACGCCA GCAAATCCAA ATTGTCGCAA TCAATGAGTT GGCTAAGCCT 
GAAGCCATTA TTCATCTGAC CCAGTACGAT ACTACCCACG GGCGGTTTCA GCCCAGAGTC 
AAATTAGTCG ATGGGCAGAT GCAGATCGGC GACGATACCA TCAAGATTTT TCACGAGCCG 
GATCCGGCAA AACTTCCTTG GCGTGAGCTG GATATTGATA TCGTTTATGA AGCCACTGGC 
GCCATTTTAG ATCGCCAAAG CTGCGAAGCA CATATCCACG CGGGTGCCAA ACAAGTCTTA 
ATTAGTCATC CTTCATCGGC CGATGTCGAC GGCACTATCG TTTACGGTGT GAACCACGAT 
CTATTGCGCG CCGAGCATAC CGTGGTCTCT AATGCCTCAT GTACCACCAA CTGTATCGTG 
CCTGTGATTG ATGTACTCGA TAAACACTTT GGCGTGAAAA GTGGCGCGAT TACCACCATC 
CATTCAGCGA TGAACGATCA GCAAGTGATT GATGCCTATC ATGATGACTT ACGCCGCACC 
CGAGCGGCTG GGCAGTCGAT TATTCCCGTT GATACTAAAC TTGCCCGCGG TATTGAGCGG 
ATTTTGCCGC ACATGAAGGA CAAATTTGAG GCGATTTCGG TGCGTGTTCC CACGATCAAC 
GTAACAGCTA TCGATCTTTC GGTAACATTA GATAAAACAG TGGATATTGC GACCGTCAAT 
CAAGTGTTAG AATTGGCCGC CAATGGACGA TTTAACGGCA TCTTAGGCTA TACTGACGAG 
CCGCTGGTAT CCTGTGATTT TAACCATGAT CCGCGCTCCA GTATTGTCGA TGGCACCCAG 
ACTCGAGTCA GCGCTGGGCA GTTAGTCAAA TTGCTGCTGT GGTGCGATAA CGAGTGGGGC 
TTTGCCAATC GCATGTTAGA TACCAGTTTG GCGATGATTG CAGCTAAACA AAGCTGA
 
Protein sequence
MIRVAINGYG RIGRSILRAL YESGKRQQIQ IVAINELAKP EAIIHLTQYD TTHGRFQPRV 
KLVDGQMQIG DDTIKIFHEP DPAKLPWREL DIDIVYEATG AILDRQSCEA HIHAGAKQVL 
ISHPSSADVD GTIVYGVNHD LLRAEHTVVS NASCTTNCIV PVIDVLDKHF GVKSGAITTI 
HSAMNDQQVI DAYHDDLRRT RAAGQSIIPV DTKLARGIER ILPHMKDKFE AISVRVPTIN 
VTAIDLSVTL DKTVDIATVN QVLELAANGR FNGILGYTDE PLVSCDFNHD PRSSIVDGTQ 
TRVSAGQLVK LLLWCDNEWG FANRMLDTSL AMIAAKQS