Gene SO_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0916 
Symbol 
ID1168762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp944481 
End bp945410 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content46% 
IMG OID637342883 
ProductMarR family transcriptional regulator 
Protein accessionNP_716545 
Protein GI24372503 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases
[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATG ATTTAGGCTC TTCTAGCCAA CTCAGGCAGC TCTCCCGCTA TATGGTGAGA 
CATTTAGGCA TGCTTAACGC AGCGGTAGGT GATTTACCCC TCTCCCCCGT GCAGGCCCAT 
GCCTTGCTTG AGATAGGTAA TCAACCACAA ACCATTAAGG ATCTCGCCAA CAAACTCAGC 
ATTGATAAAT CCAATGCCAG CCGAGCCATC AAACACTTGA TCGATAAGCA TCTCGCCCAA 
AGTCAAATGC ACCCACGGGA TAGTCGTTGC CTTGTCGTGC AACTGACTCC TGCGGGTAAA 
AAGCTACTCG CAAAACTCGA TAACCAACAA AATCAACTAT TTAAAGAAAT CTTAGCGCAA 
CTCACCCCTG ATCAAATTCA ACATATTGAG CAGGCGCTGA TGCAGTACAA CCAAGCAATA 
CATAAAACCA AACAGCAATC GGGTTGTATT ATTCGTGTAG CCTCAGCCAC CGATGATGCC 
GCCATAGCCC AAGTTATCCG CGATGTATCT GCCGAATATG GTTTGACCGC AGATAAAGGC 
TATAGCGTGG CCGATCCCAC CTTAGATTGT TTAAGTCAGA TTTATTCGCA AGCGGGTGCT 
CAATATTGGG TTGTTGAATA TGAAGGTAAA GTCGTTGGTG GTGCAGGCAT TGCCCCACTT 
GCCAATAATG CAGGCATTTG TGAACTACAA AAAATGTACT TTATGCCCGA AATCCGCGGT 
AAAGGCTTAG CTAAACGTTT AGCACTACTC GCTCTCGACT TTGCCCGTCA AACGGGTTAC 
CAAAGCTGCT ACTTAGAAAC GACTGCGATA TTAAAAGAAG CACTCAAGCT CTACGAACAC 
TTAGGTTTTT ACCCTCTCAG CGCACCACTA GGAAATACCG GCCACGATGC CTGTGAGATC 
CCGATGTTAT TGCCATTACA GCCTGAATAA
 
Protein sequence
MANDLGSSSQ LRQLSRYMVR HLGMLNAAVG DLPLSPVQAH ALLEIGNQPQ TIKDLANKLS 
IDKSNASRAI KHLIDKHLAQ SQMHPRDSRC LVVQLTPAGK KLLAKLDNQQ NQLFKEILAQ 
LTPDQIQHIE QALMQYNQAI HKTKQQSGCI IRVASATDDA AIAQVIRDVS AEYGLTADKG 
YSVADPTLDC LSQIYSQAGA QYWVVEYEGK VVGGAGIAPL ANNAGICELQ KMYFMPEIRG 
KGLAKRLALL ALDFARQTGY QSCYLETTAI LKEALKLYEH LGFYPLSAPL GNTGHDACEI 
PMLLPLQPE