| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0907 |
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| Symbol | nqrF-1 |
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| ID | 1168753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 933603 |
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| End bp | 934820 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342875 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | NP_716537 |
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| Protein GI | 24372495 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGG CAATAGGCAT AGGCATGTTC ACCTTAGTGG TGTGCCTACT GGTGATAGTA
ATCCTTATCG CCAAAAAGAA ATTAGTGACT ACCGGTGAGA TCACTATCGG GATTAACGAC
GATGCCGAAA AAAGCATCAA GGTTGCAGCG GGCGACAAAC TGCTCGGCGC TTTAGCGAGC
AAGAATATTT TTATTCCTTC GGCCTGTGGT GGCGGTGGTA CTTGTGGCCA GTGCCGCGTA
AAAGTCAAAT CGGGTGGTGG TGATATTCTA CCAACCGAAC TTGGGCATAT CACCAAGAAA
GAAGCTAAAG AAGGCTGTCG TCTTGCCTGC CAAGTGGCGG TGAAAACCGA TATGGAACTT
GAGCTGGAAG AAGAAATCTT TGGCGTGAAG AAGTGGCAAT GTGAGGTGAT CTCAAACGAT
AACAAAGCCA CCTTTATCAA AGAGTTATTA TTAAAACTGC CCGAAGGCGA AGACGTACAT
TTCAAGGCGG GTGGTTATAT CCAAATTGAA GCGCCAGCCC ATGTGGTCAA ATACGCTGAC
TTTGATATTC CGGCGAAGTA CCGCGACGAT TGGGAAAAAT ACGGCCTGTT CGACTTGGTC
TCAACCGTGA ACGAAGACGT GCTGCGCGCC TATTCGATGG CGAACTATCC CGATGAAAAG
GGTCGCATTA TGCTTAACGT GCGGATTGCG ACGCCACCTT CAGCCAATGT GCCACCGGGT
AAGATGTCTT CTTACATCTT TAACCTGAAG GCAGGGGATA AGGTGACCAT TTCTGGCCCA
TTCGGTGAGT TCTTTGTGAA GGATACCGAT GCAGAAATGG TATTTATCGG CGGTGGTGCG
GGTATGGCGC CGATGCGCTC GCATATTTTC GATCAGCTAA AGAGCAAGAA AACCAAGCGT
AAAATGAGCT TCTGGTATGG CGCCCGCTCA ACCCGTGAGG TGTTTTACCA ACAAGATTTC
GATACCTTAG CCGCTGAGAA TGACAACTTC GTCTGGCATG TAGCGCTGTC TGAGCCGTTA
CCTGAGGATA ACTGGACTGG TTACACTGGC TTTATCCATA ATGTGCTGTA TGAGAATTAT
CTTAAAAATC ATAAGGCACC CGAGGATTGT GAGTTCTATA TGTGTGGTCC TCCAATCATG
AACTCCTCGG TGATTAAGAT GCTCGAAAGC CTAGGGGTTG AGCCTGAAAA TATCCTGCTC
GATGACTTTG GTGATTAG
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| Protein sequence | MEMAIGIGMF TLVVCLLVIV ILIAKKKLVT TGEITIGIND DAEKSIKVAA GDKLLGALAS
KNIFIPSACG GGGTCGQCRV KVKSGGGDIL PTELGHITKK EAKEGCRLAC QVAVKTDMEL
ELEEEIFGVK KWQCEVISND NKATFIKELL LKLPEGEDVH FKAGGYIQIE APAHVVKYAD
FDIPAKYRDD WEKYGLFDLV STVNEDVLRA YSMANYPDEK GRIMLNVRIA TPPSANVPPG
KMSSYIFNLK AGDKVTISGP FGEFFVKDTD AEMVFIGGGA GMAPMRSHIF DQLKSKKTKR
KMSFWYGARS TREVFYQQDF DTLAAENDNF VWHVALSEPL PEDNWTGYTG FIHNVLYENY
LKNHKAPEDC EFYMCGPPIM NSSVIKMLES LGVEPENILL DDFGD
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