| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0903 |
|---|
| Symbol | nqrB-1 |
|---|
| ID | 1168749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 930300 |
|---|
| End bp | 931532 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637342871 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit B |
|---|
| Protein accession | NP_716533 |
|---|
| Protein GI | 24372491 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
|---|
| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC AACCTAAAAA ACCTGATTTA CAGGACGCTA CTGGTTCGCA AGAAGAGTAT
TACGCCACAG GCAAATCGAT GAAGGGCTTT GTGCGCTCAT TGGTGATCGG AAGTGGTCGT
AGCACGAAGG GACAAGTACA CGTACGTGAT GCCATTGATG TTAAACGTAC CATGACCTTA
GTCGGCCTAT GTTTATTGCC AGCCATTTTA TTTGGCTTAT ATAACGTGGG TTTACAGGCG
CAACTCGCAC TCGCAAGCGG CTTAAGCACT CCAGATACGT GGAAGCTTGC GCTGTTTAAC
GCCTTAAGCG GTGGCTTAAC GGCAGAGACC AGTGTGATTG GCTTGTTCCT CTATGGCTTA
AGTTTTTATC TGCCGATTTA CTTAACGGCA TTGCTGACCG GCCTTTTCTG GGAAGTGGTG
TTTGCTAAGG TTCGTCACCA AGAATTGCAC GAAGGCTTTT TCGTTACCGC CCTGCTATTT
ACGCTGATTT TACCTGTTTC GATTCCGCTC TGGTTGGTAG TAATGGGGAT TAGCTTTGGG
GTAGTGATTG CCAAAGAGCT GTTTGGTGGC ATGGGATATA ACTTCCTTAA CCCCGCCTTA
GCTGGCTTGG CGTTTATCTA TTTTGCCTAT CCGTCAGAAG TCACAACCGT TAAGCAGTTA
GTCGCAGTAG ATGGTTTTTC TGGCGCGACT GCATTAGCGC AAGCCGCAGC CGGACAATTA
CAATTTGCCG ATTACGCTTG GTACAGCGCC TTTAGCGATC CCAACTGGTG GAATAACTTC
TTTGGCTTTA CCGTGGGGGC GATTGGTGAA ACCAGCACGC TAGCGGTATT GCTCGGTGGT
TTGTTACTGC TGATCACCCG TTTAGCTGAT TGGCGTATCG TCGTGGGCGT GATGTTAGGC
ATGATTGCCA CCGCTACCCT GTTTAATCTG ATTGGCTCAA GTACCAACCA AATGATGTCA
ATGCCGTGGA CATGGCATTT AGTCACCGGT GGTTTTGCTA TCGCGATGAT GTTTATGGCG
ACCGATCCAG TGACCACCTC TTATACCCGC CCAGGCAAGT TTGTCTACGG CGCGTTGATT
GGTTTTATGA CAGTCCTTAT CCGTGTTGCT AACCCTAAAA TGCCTGAAGG CGTGATGTTA
GCGATTCTGT TCGCCAACCT GTGGGCACCG CTGTTCGATT ATCTGGTGGC CCGTGCCAAC
ATCAAACGGA GATTAAAACG TCATGGTATT TAA
|
|---|
| Protein sequence | MTTQPKKPDL QDATGSQEEY YATGKSMKGF VRSLVIGSGR STKGQVHVRD AIDVKRTMTL
VGLCLLPAIL FGLYNVGLQA QLALASGLST PDTWKLALFN ALSGGLTAET SVIGLFLYGL
SFYLPIYLTA LLTGLFWEVV FAKVRHQELH EGFFVTALLF TLILPVSIPL WLVVMGISFG
VVIAKELFGG MGYNFLNPAL AGLAFIYFAY PSEVTTVKQL VAVDGFSGAT ALAQAAAGQL
QFADYAWYSA FSDPNWWNNF FGFTVGAIGE TSTLAVLLGG LLLLITRLAD WRIVVGVMLG
MIATATLFNL IGSSTNQMMS MPWTWHLVTG GFAIAMMFMA TDPVTTSYTR PGKFVYGALI
GFMTVLIRVA NPKMPEGVML AILFANLWAP LFDYLVARAN IKRRLKRHGI
|
|---|
| |