| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0887 |
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| Symbol | |
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| ID | 1168734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 915983 |
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| End bp | 917095 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342857 |
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| Product | agmatine deiminase |
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| Protein accession | NP_716518 |
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| Protein GI | 229220631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACG TGAATGTGGA TGTCACGCCG TTAACGACTA AGCCATCACA AGATGGTTTT
TATATGCCCG CCGAATGGGC TGCGCAGCAA GCTGTGTGGA TGATTTGGCC CTATCGTCCT
GATAACTGGC GCGCAGCTGG TGCGTATGCT CAGGCGACTT TCGCTAAGGT GGTCGATGCG
ATTGGCGCGG CAACGCCAGT GTATATGGGT GTTCCTAAAG CTTTTTTAGC CAAAGCCAAA
ACGGTAATGC CATCCCACGT TACCTTGGTT GAAATGGACA GTAACGATTG CTGGGCTCGC
GATACAGGGC CAACTGTGGT CGTTAATGCC GAGGGCGAAT GCCGCGGTGT TGACTGGGGC
TTTAATGCTT GGGGCGGCCA TAACGGTGGT TTGTACTTCC CATGGGATAA GGACGAGCAA
GTCGCGCAGC AAATGCTTGC ACAACATGGC TTTGCCCGTT ATCGCGCGCC GCTGATCCTC
GAAGGTGGCT CCATCCATGT CGATGGTGAA GGCACCTGTA TGACGAGTGC CGAATGTTTA
CTCAACGCCA ACCGTAACCC TGAACTGACA AAGGAACAGA TTGAAGGCTT ACTGCGTGAC
TATTTGAATG TTAAGCAGTT TATCTGGTTA CAAGATGGCG TGTATATGGA TGAGACTGAT
GGCCATATCG ATAATATGTG CTGTTTTGCC CGTCCTGGTG AAGTCATTCT GCACTGGACT
GATGATGAAT CGGATCCACA ATATCCACGT TCAAAAGCTG CGCTCGAAGT GCTGCAAAAT
ACCGTGGATG CACAAGGTCG TAAGTTAAAA ATCCATCTGT TGCCACAACC AGGGCCGCTG
TATTGCAGCG AAGAAGAATC AAAAGGTGTA ACTGAGGGCA CTGGTGTGCC ACGCACGGCA
GGTGAGCGTT TAGCGGGTTC CTATGTGAAC TTTTTAATCA CCAATCATCG CATCGTATTC
CCGCTGCTTG ACCCAGCAAC CGATGATATC GCCGCTCAAA AGCTGCAGGA AATTTTCCCT
GAGCATGAGA TTGTGGGTGT GCCAGCCCGT GAGATTTTAT TAGGTGGCGG CAATATCCAT
TGTATTACTC AGCAAATCCC TGCTGGAAAG TAA
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| Protein sequence | MTNVNVDVTP LTTKPSQDGF YMPAEWAAQQ AVWMIWPYRP DNWRAAGAYA QATFAKVVDA
IGAATPVYMG VPKAFLAKAK TVMPSHVTLV EMDSNDCWAR DTGPTVVVNA EGECRGVDWG
FNAWGGHNGG LYFPWDKDEQ VAQQMLAQHG FARYRAPLIL EGGSIHVDGE GTCMTSAECL
LNANRNPELT KEQIEGLLRD YLNVKQFIWL QDGVYMDETD GHIDNMCCFA RPGEVILHWT
DDESDPQYPR SKAALEVLQN TVDAQGRKLK IHLLPQPGPL YCSEEESKGV TEGTGVPRTA
GERLAGSYVN FLITNHRIVF PLLDPATDDI AAQKLQEIFP EHEIVGVPAR EILLGGGNIH
CITQQIPAGK
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