Gene SO_0885 details

Gene Information

• Locus tag: SO_0885
• ID: 1168732
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 913424
• End bp: 915337
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637342855
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_716516
• Protein GI: 24372474
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGCA TCAACCAAGC ACAATTAATC CGTGGTAGCA AAACCCTGCT CGACGAAGCC 
TCTCTGACCA TCTATCCCGG CCATAAGGTC GGCCTAGTGG GCGCCAACGG CACGGGTAAA 
TCCTCACTGC TGGCATTAAT TATGGGTCAC CTGAGCTTAG ATAAAGGCGA GTTTAGTATG 
CCTTCAGGTT GGCAGATTGC CAGCGTCGCC CAGGAAACCC CTGCGCTCGA TATGTCTGCA 
CTTGAATATG TACTTGATGG CGATAAAGAA TATCGCCAGC TTGAGGCTGA TCTGCACATT 
GCACAGGAAC ATAATGATGG CCATGCCATT GCCACCTTGC ACGGTAAAAT CGATGCCATT 
GGCGGTTATG CTATTCGCGC CCGCGCCGGA GCCCTGCTTG CAGGTTTAGG CTTTAGCGAA 
GCCGAGCAAA ATAACCCCGT GAAAAGCTTT TCGGGCGGTT GGCGGATGCG CCTCAACTTA 
GCCCAAGCAC TGCTGTGCCG CTCGGACTTA CTGCTGCTTG ACGAACCAAC CAACCACTTA 
GACTTAGATA CCATGTACTG GCTCGAAGGT TGGATTAAGT CCTATCAAGG CACACTGATT 
TTAATCAGCC ACGATAGGGA TTTTATCGAT GAAATCGTTG ATGAAATCGT CCATGTCGAA 
AATCAAAAAC TCAACTTCTA CAAAGGCAAC TACAGTGCCT TTGAGCGCAT CCGCGCTGAA 
CGTATGGCGC AACAACAGGT CGCCTTTGAA CGCCAACAAA AAGAACGGGC GCATATGCAG 
TCTTTTGTTG ACCGCTTCCG CTACAAGGCC AGTAAAGCCA AGCAAGCACA GAGCCGCTTA 
AAGGCGCTGG AGCGGATGAC TGAGCTATTG CCATCCCAAG CCGATAGCCC GTTTTATATG 
GAGTTTCGCC CACCAGAAGC CCTGCCCAAT CCGCTGATTA AGATGGAGCA AGTGGCCGTT 
GGCTATGGCG ATAAGCAAAT CCTCAGCAAA GTGCATTTAA ACTTAGTGCC CGGTGCGCGC 
ATTGGGTTGC TCGGCCGTAA CGGTGCGGGT AAATCAACCC TAATCAAGCT GTTATCGGGC 
CAGTTATCAC CGATGACCGG ATTGTATGAG CCCAATCCCG GCCTGAATAT CGGTTACTTT 
GCCCAGCACC AAATCGAATT TTTACGCTTA GACGATACGC CGCTGCAACA TTTAGTGCGC 
CTTGCGCCCA ATGCCCGCGA GCAGGAATTG CGTAACTTCC TCGGCGGTTT TGGCTTTAAT 
GGCGATATGG CACTCTCGCC AGTGCGCCCC TTCTCGGGTG GCGAAAAAGC CCGTTTAGTG 
TTGGCATTAT TGGTATGGCA ACGGCCCAAT CTGTTGCTAC TTGACGAACC AACCAACCAT 
TTAGATTTAG AGATGCGCCA TGCTTTAACC ATGGCATTGC AAACCTTTGA AGGTGCCATG 
GTGATTGTAT CGCACGACCG CCATTTATTG CGCTTAACCT GTAGCGACTA CTATTTGGTT 
GATCAAGGTG AAGTACAAGC CTTCGATGGT GATCTTGACG ATTACCACCA ATGGTTACTC 
GATGCCGCTA AGGCTGCCAG TGCCAACCAA GCGGCCAACA GCGATGACAC AAAACCCGCT 
GTCGATAAGA AGCAGCAAAA GCGCTTAGAG GCTGAGCTAC GCCAAAAAGT GTCCCCCCTT 
AAACGTAAGC AAGCCAAATT AGAAATTGAT CAACAAAAAC TCAGTGAGCG TCTCGCCGAG 
TTAGAACATT TACTGGCCGA TGGTGAGTTA TATGATCAAG ACAATAAAGC TAAACTCACC 
TCAGTGCTCA GTGAACGCAC CAGCTTGACA CAGACGCTAG AAGAAAGTGA AATGCAATGG 
CTTGAGTTGC AAGAAGAAAT TGATACCATG GAACTTGAGT TAATGGGCCA ATAA 

 

Protein sequence

MISINQAQLI RGSKTLLDEA SLTIYPGHKV GLVGANGTGK SSLLALIMGH LSLDKGEFSM 
PSGWQIASVA QETPALDMSA LEYVLDGDKE YRQLEADLHI AQEHNDGHAI ATLHGKIDAI 
GGYAIRARAG ALLAGLGFSE AEQNNPVKSF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL 
DLDTMYWLEG WIKSYQGTLI LISHDRDFID EIVDEIVHVE NQKLNFYKGN YSAFERIRAE 
RMAQQQVAFE RQQKERAHMQ SFVDRFRYKA SKAKQAQSRL KALERMTELL PSQADSPFYM 
EFRPPEALPN PLIKMEQVAV GYGDKQILSK VHLNLVPGAR IGLLGRNGAG KSTLIKLLSG 
QLSPMTGLYE PNPGLNIGYF AQHQIEFLRL DDTPLQHLVR LAPNAREQEL RNFLGGFGFN 
GDMALSPVRP FSGGEKARLV LALLVWQRPN LLLLDEPTNH LDLEMRHALT MALQTFEGAM 
VIVSHDRHLL RLTCSDYYLV DQGEVQAFDG DLDDYHQWLL DAAKAASANQ AANSDDTKPA 
VDKKQQKRLE AELRQKVSPL KRKQAKLEID QQKLSERLAE LEHLLADGEL YDQDNKAKLT 
SVLSERTSLT QTLEESEMQW LELQEEIDTM ELELMGQ