Gene SO_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0871 
SymbolfolK-1 
ID1168718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp901020 
End bp901508 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content48% 
IMG OID637342841 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionNP_716502 
Protein GI24372460 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG TATTTGTCGC CCTAGGGGCG AATCTTGAAG ATCCCAAAGC ACAGTTGGAC 
AATGCCTTGA TGGCCTTGTC CAGCTTGGCT GAAAATCAAA GCCTTAAGGT TTCGCCCTAC 
TATCACTCAA CGCCGATGGG AGAGGTAGTG CAACCCGACT ATATTAATGC CGTGGCAAGT 
TTTGAGACCA AGCTTACCCC ACTCGCCTTG TTAGATGCAC TGCAACACAT CGAAAATACC 
CAAGGCCGTG TGCGCAAAGA ACGTTGGGGA CCTAGAACCT TAGATCTCGA CTTACTCTTA 
TATGGTGATG CCATCATCGA TGAGCCCAGA CTCAAAGTAC CGCACTATGG CATGAAAGAA 
CGTAGCTTTG TACTGGTGCC TTTAGCCGCT ATTGCTCCCG ATCTGGTTTT ACCCTGTAAA 
ACACCGCTAC AAAGCCTCAT CAGTGAAAAA TTCTTGGCCG AGTTACAACT ACTGGGCAAT 
GATCATTGA
 
Protein sequence
MTQVFVALGA NLEDPKAQLD NALMALSSLA ENQSLKVSPY YHSTPMGEVV QPDYINAVAS 
FETKLTPLAL LDALQHIENT QGRVRKERWG PRTLDLDLLL YGDAIIDEPR LKVPHYGMKE 
RSFVLVPLAA IAPDLVLPCK TPLQSLISEK FLAELQLLGN DH