| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0870 |
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| Symbol | panB |
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| ID | 1168717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 900169 |
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| End bp | 900963 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342840 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | NP_716501 |
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| Protein GI | 24372459 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAAG TTACTAGCTC AACCCTGTTG AAATACAAAC AGGAAGGTAG AAAATTCACC
GCTCTGACAG CCTATGATGC CAGCTTTGCC AGCGCGTTCG ACGGCGAAGG CATCGATGTG
CTACTGGTCG GCGATTCTTT GGGAATGGTT CTCCAAGGCC ACGATGATAC CCTGCCCGTC
ACCACCGCCG ATATTGCCTA TCACACCCGT TGCGTGCGTC GCGGTATTGA GCGCTCACTG
CTGATCGCTG ATATGCCATT TATGAGTTAT GCCACGCCAG AACAGGCAAT GGAAAATGCC
ACCACGCTCA TGCAAGCGGG TGCCAATATG GTCAAACTTG AAGGTGGCCA CTGGTTATTG
GAAACAGTCA CCAAATTGAC TGAACGTGGC ATTCCTGTTT GTGCTCACTT GGGCCTAACA
CCACAATCAG TAAACGTTTT TGGTGGTTTT AAAGTGCAGG GCCGCGACGC TGAAAATGCC
CAGCGCATTA TCGATGAAGC TAAAGCGTTA GAAGCGGCAG GCGCGCAGTT ATTAGTGGTT
GAATGTATTC CCGCATCACT TGCCACCGCA ATTACTCAAG CCTTAACTAT TCCCGTTATC
GGCATTGGTG CAGGCGCTAC CACCGACGGC CAAATTCTGG TCATGCACGA TGTATTAGGT
ATCTCCAGTG GTTATATTCC ACGTTTTTCG AAAAACTACC TAAAACAAAC TGGCGAGATC
CGTTCTGCCG TGCGGGCGTA TATTGAAGAA GTCGCCAACG GCAGCTTCCC CAGTGCGGAG
CACACGTTTA ACTAA
|
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| Protein sequence | MSKVTSSTLL KYKQEGRKFT ALTAYDASFA SAFDGEGIDV LLVGDSLGMV LQGHDDTLPV
TTADIAYHTR CVRRGIERSL LIADMPFMSY ATPEQAMENA TTLMQAGANM VKLEGGHWLL
ETVTKLTERG IPVCAHLGLT PQSVNVFGGF KVQGRDAENA QRIIDEAKAL EAAGAQLLVV
ECIPASLATA ITQALTIPVI GIGAGATTDG QILVMHDVLG ISSGYIPRFS KNYLKQTGEI
RSAVRAYIEE VANGSFPSAE HTFN
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