Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0869 |
Symbol | panC |
ID | 1168716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 899247 |
End bp | 900092 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342839 |
Product | pantoate--beta-alanine ligase |
Protein accession | NP_716500 |
Protein GI | 24372458 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTA GCGCCCATAT CGATGATATT CGTACTCAAG TGCGAGCATG GCGTGCCAAG GGCGAAACTG TCGCCTTTGT GCCAACCATG GGTAATCTCC ATCAGGGACA TATCACCTTA GTGAAAGAAG CGGCTAAGAA GTGCGATCAT GTGGTCGCAT CTATCTTCGT TAATCCCATG CAATTTGGGC AAAATGAAGA TCTCGATGCC TACCCGCGCA CCTTAGAGGC CGATAGCCAA GCGTTAACTG CAGCGGGAGC AGAGCTGTTG TTTACACCAA CCCCAGCGAT TATTTATCCC AAAGGGTTAG CACAGCAAAC CTATGTAGAA GTACCAGGGA TCTCCGATGT GCTCTGCGGC GCCAGTCGTC CAGGTCACTT CCGTGGCGTC GCGACGATTG TCTGTAAACT GTTCAACATA GTGCAACCGG ATATTGCGTT CTTTGGTAAT AAGGATTATC AACAACTGTT AGTGATCCGC ACTATGGTTG AAGACTTATC TTTACCCATT GAAATTATCG GTATTGACAC TATTCGCGAA GCCTCAGGTT TAGCCATGAG TTCACGTAAT GGCTACCTTA CTGCGCAAGA AAAAGCCGCT GCGCCCGCAC TGAAAAAAGC CATTGATGCC ATGGCGCAAG GGATAAAGCA AGGCATCAGC ATCGAACAAG TCACCGAGGA AGCCAAAGCG AGCTTAACCG CTGCCGGCTT TACCCCTGAT TACTTAGAAG TTCGCCATGC TGATACCTTA GCGAAGGCTG AAACCCAGGA TAAAGCCCTA GTAATTTTAG CCGCAGCTTA CCTTGGTAAA GCGCGGCTTA TTGATAATCT GCGCTTTGAT CGTTAA
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Protein sequence | MITSAHIDDI RTQVRAWRAK GETVAFVPTM GNLHQGHITL VKEAAKKCDH VVASIFVNPM QFGQNEDLDA YPRTLEADSQ ALTAAGAELL FTPTPAIIYP KGLAQQTYVE VPGISDVLCG ASRPGHFRGV ATIVCKLFNI VQPDIAFFGN KDYQQLLVIR TMVEDLSLPI EIIGIDTIRE ASGLAMSSRN GYLTAQEKAA APALKKAIDA MAQGIKQGIS IEQVTEEAKA SLTAAGFTPD YLEVRHADTL AKAETQDKAL VILAAAYLGK ARLIDNLRFD R
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