| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0867 |
|---|
| Symbol | |
|---|
| ID | 1168714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 895915 |
|---|
| End bp | 898371 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637342837 |
|---|
| Product | serine protease |
|---|
| Protein accession | NP_716498 |
|---|
| Protein GI | 24372456 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGCCG TACCGGCTAT GGCAAAAGAT GCCCCTGTCT ATGAAAAAGA TGCCATTCTC
GTGGTGTATA AAGACAATGC AACTAAAGCA GAGCGCTCGG CGGCTCAGCG TTTAATTCGT
GGAACATTAA CCGATGTCAA TGCCGATGGT GTCGACGATA AATTTCCGCA TTTACTTAAC
GGCAAGCTGG CCCGTTTAGC ATTGCGTAAA GGCGCCAATA TTGAAGATGC CATTAAGGTG
ATCAGCCGTC ATCCTGCGGT GAAATACGCT GAGCCTAACT ATATTATCAA AGCGATAGGT
ACACCTGATG ACCCAAGTTT TGCCAGCCTA TGGGGAATGA ATAACACTGG CCAAAGCGGT
GGCACTGCCG ATGCGGATAT CGATGCACCT GAAGCTTGGG AAATCACCAC AGGTAGCTCT
GATGTGGTGA TTGGCGTTAT CGATACCGGT GTGGATTACA ACCATCCCGA TTTGCAAGCC
AATATGTGGG TCAATGCGGG CGAAATTGCG GGCAATGGCA TCGATGATGA CGCAAACGGT
GTTATCGACG ATATTCATGG TTACAGTGCC GTGAATAATA ACGGAAATCC AATGGACGGA
AACGGCCACG GTACCCATGT TTCTGGCACG ATTGGCGCTA AAGGTAATAA CGGTGTCGGT
GTAGTAGGCG TTAACTGGGA CGTTAAAATT GCCGGATGTC AGTTCCTCGA TACTGACGGT
TATGGCTCTA CCGCGGGCGC TATTGCGTGT ATCGATTATT TCACCAACCT TAAGGTTAAT
CATGGGGTTG ATATTAAAGC GACCAACAAC TCTTGGGGCG GTGGCGGCTT TAGTCAAGCA
TTAAAAGATG CAATTGAAGC GGGTGGTGAA GCAGGGATTT TATTTGTTGC CGCAGCAGGA
AACGATGCCG TCGATAATGA TGCGAGCCCA CACTATCCTT CAAGCTATAA CTCTGATGTG
GTGTTCTCCA TTGCCAGTAC AACTCGCAAT GACCGTATGT CAGACTTCTC ACAATGGGGT
TTAACCAGTG TTGATATGGG CGCGCCAGGC TCGGCGATTT TATCAACTGT CCGTGGCGGT
GGTTACGCGA CTTACTCTGG TACCTCGATG GCAACTCCCC ACGTGACGGG CGCCGCCGCT
CTCGTTTGGG CATTAAACCC TGACTTAACA CCTGTTGAAA TGAAAGAACT ACTGATGGCC
TCAGGTGATG CGAATGCGGA TTTAACCGGT AAAACGGTTG CGGGTACTCG CCTCAATGTG
GCTAATGCGC TGGAGCAGGC AAACCCATCA CCTAGCTATA AGTTCACCGT ATCACCGGCT
TCACAATCTG TCGAAGCAGG CAGCGCTGCA AGCTATAACT TCAGTGTTGG CAGTGTGGCA
GGTTGGGATG GTGATGTCGC ATTGACTGTC AGCGTGTCAC CTGCACTTGA AGGGGTTTCA
TTATCAAGTT CAACCGTTTC TGCGGGTGGT TCATTTACCT TAAACGTGGC GACAACCGCG
CAAACGGTTT GGGGTGATTA CAGCATTACG GTGACGGGCA ATGATGGTGC GATTGAAAAG
TCTAAAGTCG TGTCGCTTAA TGTCTTCCCA CAAGGATTAA ACGACTTTAC CTATGGTAAT
GAGAACTCTG TAGCCATTCC GGATAACAAC CCTAATGGCG TTATTAGCAC AATAGAAGTC
GCCGACGATG TACAGATTTT TGGTGTGCTC GCTGACGTGA ATATCAGTCA CACTTGGATT
GGTGACTTAC GCGTTGTGCT AACCTCACCA GCGGGTACTC AAGTGGTGTT ACATAACCGC
GATGGTGGCA GTGCTGATAA TATCGTTAAG AGCTGGGATC TAAGCGCATT CGATGGTGAA
AATGTACGTG GTACTTGGTC ATTATCTGTC GATGACAATG TGGGTTCAGA TACCGGAACG
CTTAATAACT GGGGCTTAGT CATCAGCGGC TTAGGTGAGG CTTCCCCAGC TGCGCCTGTT
GCAGGTTTTG AGTTTGCCGT TGAAGGATTA GGCGTAGCCT TCACCAACAC CAGTACAGAT
GCAAATGATG ATATCGTCAG TTACAGCTGG GACTTTGGTG ATGGTACAAA CTCTACTGAG
ATGAACCCAA GCCATGTTTA TACCTCTGCG GGTACTTATA CTGTGTCTTT GACTGTGACC
GATTCAATGG ATCACAGCAA CACTGTGACG ATGCCTGTAC AAGTCTATGA GCATAATATT
AATGCTGCTG TTAGCCGCGC ATTAGTATCG CGCCGTGGCA GTGCAATGGT AGATCTCACT
TGGGATAGTG CTTTAGGTGA AAACGTTGCC CTTTACCGGA ATGGTGAGTT GGTGGTAACG
ACTGAGAACG ATGGTAGCTA TCGTGATCGC TTTACGACCA CCGCCTCAAG TGTGACTTAT
CAAGTGTGTG AAACGACAGG AACATTATGT TCTGCGCCAG TTGTCGCGCA GTTCTAA
|
|---|
| Protein sequence | MSAVPAMAKD APVYEKDAIL VVYKDNATKA ERSAAQRLIR GTLTDVNADG VDDKFPHLLN
GKLARLALRK GANIEDAIKV ISRHPAVKYA EPNYIIKAIG TPDDPSFASL WGMNNTGQSG
GTADADIDAP EAWEITTGSS DVVIGVIDTG VDYNHPDLQA NMWVNAGEIA GNGIDDDANG
VIDDIHGYSA VNNNGNPMDG NGHGTHVSGT IGAKGNNGVG VVGVNWDVKI AGCQFLDTDG
YGSTAGAIAC IDYFTNLKVN HGVDIKATNN SWGGGGFSQA LKDAIEAGGE AGILFVAAAG
NDAVDNDASP HYPSSYNSDV VFSIASTTRN DRMSDFSQWG LTSVDMGAPG SAILSTVRGG
GYATYSGTSM ATPHVTGAAA LVWALNPDLT PVEMKELLMA SGDANADLTG KTVAGTRLNV
ANALEQANPS PSYKFTVSPA SQSVEAGSAA SYNFSVGSVA GWDGDVALTV SVSPALEGVS
LSSSTVSAGG SFTLNVATTA QTVWGDYSIT VTGNDGAIEK SKVVSLNVFP QGLNDFTYGN
ENSVAIPDNN PNGVISTIEV ADDVQIFGVL ADVNISHTWI GDLRVVLTSP AGTQVVLHNR
DGGSADNIVK SWDLSAFDGE NVRGTWSLSV DDNVGSDTGT LNNWGLVISG LGEASPAAPV
AGFEFAVEGL GVAFTNTSTD ANDDIVSYSW DFGDGTNSTE MNPSHVYTSA GTYTVSLTVT
DSMDHSNTVT MPVQVYEHNI NAAVSRALVS RRGSAMVDLT WDSALGENVA LYRNGELVVT
TENDGSYRDR FTTTASSVTY QVCETTGTLC SAPVVAQF
|
|---|
| |