| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0858 |
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| Symbol | |
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| ID | 1168705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 881216 |
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| End bp | 882574 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637342828 |
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| Product | sodium:alanine symporter family protein |
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| Protein accession | NP_716489 |
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| Protein GI | 24372447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTC AAGCCTTGCT CAGCAGCCTA AATGGTATTG TCTGGGGTCC TATCACACTT
TGTTTGTTAG TTGGCACAGG GGTTTATCTC ACTACGCGAC TAAAGCTTAT CCAAGTTTTT
CGTCTGCCAA TGGCGCTTAG CCTATTGTTT AAACCCGCTA AGGGGCATGG GGATCTATCT
TCCTTTGCCG CGCTTTGTAC TGCATTGTCT GCCACCATAG GTACGGGCAA CATTGTTGGG
GTCGCAACGG CGATTAAGAT GGGCGGTCCT GGCGCCTTAT TTTGGATGTG GCTTGCCGCC
TTCTTTGGTA TGGCGACCAA GTATGCCGAG TGTATGTTGG CGGTAAAATA CCGCACCACG
GATGCGCGTG GACAGATTGC CGGTGGCCCG ATGTATTACA TCGAGCGTGG CCTCGGTTTG
CGTTGGATGG CGAAGTTATT TGCGCTGTTT GGCGTGGGAG TAGCGTTTTT CGGTATTGGG
ACTTTTGCCC AAGTGAATGC GATAAGTGAT GCCTTAACCA TTGCTTTTGA TGTACCAACA
TGGACGACTG CCCTAGTGCT AACCCTGCTG GTGGCGGCTG TGACCTTAGG TGGGGTTAAG
CGTATTTCTA ATGTGGCGCA AAAGTTAGTA CCGGCGATGT CAATTGGTTA TGTGTTGGCC
TGTGTGTGGA TTTTATTGGG GTTTGCCGAA GCGATTTTAC CTGCGTTGCA ATTAGTGGTG
GAGTCGGCCT TTACGCCTGT GTCTGCGGCG GGGGGATTTT TGGGGGCGAC CGTGGCGCAA
GCGATTCAAA TGGGGATTGC CCGCGGGGTC TTCTCGAATG AGTCTGGCTT AGGCAGCGCC
CCCATTGCTG CCGCGGCAGC TAAAACTAAT GAACCCGTCG AGCAGGGCTT GGTGAGCATG
ACGGGGACCT TTTTTGACAC CATTATCATC TGCACTATGA CGGGGCTAGT GCTCATCATC
ACTGGCGTAT GGAGCGGTGA CACCGCAGGT GCGGCAATGA CCAGTGCGGC GTTTAGCTTA
GGTGGCTCCG CGGCCATCGG CCAGTATTTA GTCACGATCG CCTTAGTCTG CTTTGCGTTT
ACGACGATTT TAGGCTGGCA CTACTATGGG GAGCGTTGCT GGTACTATTT AGTGGGCGAG
CGAGGGTTGC GTGCCTATCA AATCGTGTTT TTAGGCCTGA TTGCTGGTGG AGCATTTATT
AAGCTCGATG TCATTTGGTT ACTGGCCGAC ACGGTGAATG GCTTAATGGC TATACCGAAC
TTAATTGCAA TTATTGGATT GCGGCACATC ATTATTGCTG AAACGCAAAG CTATTTTGTT
CGAACATTCA CAAACAGTAC ACTAAACCCT ATTTATTAA
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| Protein sequence | MNFQALLSSL NGIVWGPITL CLLVGTGVYL TTRLKLIQVF RLPMALSLLF KPAKGHGDLS
SFAALCTALS ATIGTGNIVG VATAIKMGGP GALFWMWLAA FFGMATKYAE CMLAVKYRTT
DARGQIAGGP MYYIERGLGL RWMAKLFALF GVGVAFFGIG TFAQVNAISD ALTIAFDVPT
WTTALVLTLL VAAVTLGGVK RISNVAQKLV PAMSIGYVLA CVWILLGFAE AILPALQLVV
ESAFTPVSAA GGFLGATVAQ AIQMGIARGV FSNESGLGSA PIAAAAAKTN EPVEQGLVSM
TGTFFDTIII CTMTGLVLII TGVWSGDTAG AAMTSAAFSL GGSAAIGQYL VTIALVCFAF
TTILGWHYYG ERCWYYLVGE RGLRAYQIVF LGLIAGGAFI KLDVIWLLAD TVNGLMAIPN
LIAIIGLRHI IIAETQSYFV RTFTNSTLNP IY
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