| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0856 |
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| Symbol | |
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| ID | 1168703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 877195 |
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| End bp | 879888 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342826 |
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| Product | hypothetical protein |
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| Protein accession | NP_716487 |
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| Protein GI | 24372445 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA ACGCACTGCT AGGACATAAA GCCAATCCAT ACCACCACTT AAGCAAGAAT
GGACAATGGC TGCGTATTAC TTGGGTACTC AAGGTATTTT TCGCCCATTA TCGCCACGCG
CCATTGCAGG CTGGGGCGAT TTTACTCGGA ATCGCCCTCG CCGTGACGCT GCTCATCGGG
GTAAAAGCCA CCAACGATAA TGCGATTCGT AGCTATAGTG AAGCCACAGA GCTATTAAGT
CAGCGGGCCG ATGTACTGCT GACCTCACCC GTTGGCCAAG ATAATCTCGA TGAATCGGTG
TATTTCAGTT TAAGACAGGC TGGGATTAGC CAAAGTCTTG CGGTAGTCAG TGGCAGAGTT
GCTGGCCAAA ACGGCCAGTA TTGGCAAATT GAAGGCAGCG ATATTGTCGC GGCATTGACC
GCCACATTAA CCTCAAAAAA CACTTCACCA TCCTCAAATA GCAAGGCAAC GGCTAATTCT
GCTGTCTCCA TGGGAGATCT GCCCCTTGCA GCCCTAATGA GCGGTGAGCC TGTGGTGGTG
ATGAGTGACA GTCTGGCCAG TAAAATCGCC CCCAATGGCC AGCTCAGCCT AGCCCAATCC
ATAGCCCCAT CTACCCTAAA AGTGATCCGT GTCGATGATA GTTGGGGACT TGGCAGCGCC
ATCTTGACCG ATATTTCCCT CGCCCAAAAC TTACTTGGGA TGCAGGGCAA ACTCAGTTAT
ATCGCCCTAT TTAGCGATAG GGATAAGCTA GCCGCGTTAA AACAACGGCT CGACACCTTA
GGTATCACCC CAGATCTCGC CAACTACAGT CAGCAGGATC AAGGGCAAGC CTTAATGGCG
CTTACCCGCA GTTTTCATTT AAATCTCAAT GCGATGAGCA TGTTAGCCTT TGTGGTTGGG
CTATTTATTG CCTATAACGG CGTGCGTTAC AGCCTGATGA AACGCCAACG TTTGCTGATT
CAACTGCTGC AACAGGGGCT AAAACGACTC GACGTGATGC TTGCCCTGCT CGCCGAATTA
CTATTTTTGG TTATCTTAGG ATCGGTCATT GGGTTTATTT TAGGCTTACA ACTCAGCCAT
TGGTTACAAC CTATGGTTGC CATGACGTTA GAACAGCTCT ACGGTGCCCA CTTGCTGCCG
GGCATTTGGC AATGGCATTG GTTAGCACAG GCGATCGCGC TCACCTTAGT GGCAGCGCTT
GCCGCTTGCT TGCCCTTATA TTTTGATCTT ACGCGCCAAT CCCTTGCCCA AGGCGCTAAC
CGTTATCAAC AAACTAAGGC CCACAACCAA ACCCACCAGC GGCAATTTAT CTTAGCCTGT
GGGTTACTCG TACTCGCGGC GATACTGTTT CCCTTCAGCC AAAGTTACAA CACCAGTTTG
ATATTACTAG GCATAGTGAC GGTCGCGATT CCTCTGCTGT TGCCCCAAGT ATTGCATTGG
GGAGTAAGCT TACTGCTCCC CTTCACTCGC CCTGGGCTTA AGCACTATTT GCTCGCCGAA
ACCCGCGAGC TTATCGCGCC ACTTTCCCTT GCGATGATGG CCATTTTGCT GGCATTAAGC
GCAAATGTGG CGATGAATAC CCTAGTGGGC AGCTTTGAGC AAACCCTAAG AAGTTGGTTA
GAAACCCGCT TACATGCCGA TTTATACCTG CGCCCCAGTG CTAACCGTAT GGCTGATGTA
CGAGATAAAT TAAGCCAAGA TCCTCGTGTC AGCGGCCTAT ATCAACAATG GCAAGTCGAT
GCAGAGATAT CGATCCAAGG CCCAACGCCT CAAACGATCC CCGTGAATCT TATCAGCCGT
GATGATGAGT CAATCAAGTA CACAAGTACA CTCAAGGACA GTTTACCTGA CCTATGGCAA
CGCTATTTTG GCGGACAATT TGTCTTGGTG AGTGAACCAA TGGCGATTAA GTATCAGTTG
ATGCTGGGCG ATAAAGTCAC TTTAAACGTG CTCGATAAAA CCACCAATAA CCAAGTGGTT
ATCGCAGGTA TTTATTACGA TCATGGTAAT ACCCGCAATG AGCTCATTAT TAGCCATCAA
CTGTGGCAAC AGGCACAACT GCCACTGTTA CCCATTAGCC TTGCGGCCAG TTTTTATCCT
CTGGGACAAG CTAATAAATC ATCCTCATCG GTGCTAACTC AACCAATACC CACGAACGGC
AAGCGCAGTG AAGCCGAACT GGATGAACTG CAAATGCAGC TCGCCACAGA GCTGGAGTTG
GCTCAGGCGC AAATTTATAG CCAAGCCAAC ATAAAGGCCC AAGCCATTGC TATGTTTAAA
CGCACTTTTT CAATCACGTT AGTGCTCAAT AGTTTAACCT TGCTGGTGGC CGCCATTGGG
CTATTTAGCG CCTGCTTAAT GTTAACTCAA GCACGGCAAG CGCCACTGGC ACGGCTTTAT
TCCCTAGGGG TGAGTCGCAG TAAACTTCGT ACTATGGTAT TTAGCCAAAT GCTACTGGTT
GTGGTAATCA CTTGCCTGAT TGCGATGCCT ACGGGCGCTC TGCTGGGGTA TTTATTAATC
GATAAAATCA CCCTGCAAGC CTTTGGTTGG ACCATCCCAA TGATCTGGGA CTGGTTTGCT
TATACCAAAG CCATCCTTAT CGCACTAGTG ACTTGTACCT TAGCCGTGCT CTTACCGCTT
TACTGGCAAA CCCGCAGACC GCTAATCGCC AGTTTGCAGC AGGAAACCCT ATGA
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| Protein sequence | MMNNALLGHK ANPYHHLSKN GQWLRITWVL KVFFAHYRHA PLQAGAILLG IALAVTLLIG
VKATNDNAIR SYSEATELLS QRADVLLTSP VGQDNLDESV YFSLRQAGIS QSLAVVSGRV
AGQNGQYWQI EGSDIVAALT ATLTSKNTSP SSNSKATANS AVSMGDLPLA ALMSGEPVVV
MSDSLASKIA PNGQLSLAQS IAPSTLKVIR VDDSWGLGSA ILTDISLAQN LLGMQGKLSY
IALFSDRDKL AALKQRLDTL GITPDLANYS QQDQGQALMA LTRSFHLNLN AMSMLAFVVG
LFIAYNGVRY SLMKRQRLLI QLLQQGLKRL DVMLALLAEL LFLVILGSVI GFILGLQLSH
WLQPMVAMTL EQLYGAHLLP GIWQWHWLAQ AIALTLVAAL AACLPLYFDL TRQSLAQGAN
RYQQTKAHNQ THQRQFILAC GLLVLAAILF PFSQSYNTSL ILLGIVTVAI PLLLPQVLHW
GVSLLLPFTR PGLKHYLLAE TRELIAPLSL AMMAILLALS ANVAMNTLVG SFEQTLRSWL
ETRLHADLYL RPSANRMADV RDKLSQDPRV SGLYQQWQVD AEISIQGPTP QTIPVNLISR
DDESIKYTST LKDSLPDLWQ RYFGGQFVLV SEPMAIKYQL MLGDKVTLNV LDKTTNNQVV
IAGIYYDHGN TRNELIISHQ LWQQAQLPLL PISLAASFYP LGQANKSSSS VLTQPIPTNG
KRSEAELDEL QMQLATELEL AQAQIYSQAN IKAQAIAMFK RTFSITLVLN SLTLLVAAIG
LFSACLMLTQ ARQAPLARLY SLGVSRSKLR TMVFSQMLLV VVITCLIAMP TGALLGYLLI
DKITLQAFGW TIPMIWDWFA YTKAILIALV TCTLAVLLPL YWQTRRPLIA SLQQETL
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