| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0855 |
|---|
| Symbol | |
|---|
| ID | 1168702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 875921 |
|---|
| End bp | 877198 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637342825 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716486 |
|---|
| Protein GI | 24372444 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5621] Predicted secreted hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTC GTCCATATAC CATTACCCAA TTGAAAGTGA ATGGTTTATT CGCAATGAGC
TTGCTTAAGT GCCGTACAAA CGCACGCTTA ATCAGTCAAC TCATCATCGG TGGATTACTC
CTTTTTATGA TTAGCGGCTG CGATAATGCG CCCGCGAGCG TTTCAGAATC CAAATCCATG
GGGGCTTTGC TAGGGCAAAC AAAAGAAGGC GAAACAACCT CAACGCAACA AGCCTTTGCA
AAGGTGACAC CTGAGCATCA GTTTCACTTT CCCCAAGATC ATCTTGCCCA CAACGGCTTT
CGGCAAGAAT GGTGGTATCT CACTGCTAAC TTAACCACCG AAAAAGGTGA GCAACTTGGC
GCGCAATGGA CCCAATTTAG GGTGGCACTA AAACCTCAAT ATACAGAATC GCAAAATGCG
CAACCGACTA CCCTTAAGTC CGCTTGGGCA ACTGAACAAC TCTATTTTGC CCATAGCGCA
CTGACCTCTA GCGCGGCACA TCTGGCCCAT GAGAAATGGT CTCGCGGTCA TCCAAAGCTT
GCCGGCGTCA ATGCCAATCC CTATCAAATT CATCTCGATA ACTGGCAATT GCAGAGTGAG
TCGAACGCGT TATTTCCGGC AATCTTAAGG GTTGAGACCG CAGACTTTAG TTACGAGCTA
ACGCTGACCA GCCAAGCACC GCTGCAATAT CAAGGCGATA ATGGCTATAG CATTAAAAAC
CGCGAGGGTA ACGTCGCCTC CTACTATTAC AGTCAACCTT TTATCACCAT TACTGGCCAG
ATCACCCGCC ATATCAACAT CAATGGTCAA GCCGAAAATC GGGTCGAGAA AGTCACAGGC
CAAGGTTGGC TTGACAGAGA ATGGAGCTCA CAATTTTTAA CCAAAAGCCA GCAGGGTTGG
GATTGGTTTG CCCTTCGCCT CAATGATGGT TCGGCGCTAA TGCTCTTTCA GTTAAGGGAG
CAATCCACCG ATAAGACTCA AACTCCATCA GCCTTTTACA GCGCCAGACG AATGTTTGCC
GATGGCACAG GCCGCAATAT CAACTCCCGA GACACGCCAG ATGGAATAAA AATGACGCCG
CTTGGATGGC AAACCACCCG CACCGGCAAA TACCCCGTAA GCTGGCAAGT CCAAATCCCG
AGTGAGCAAA TCGATATCCG CATCTCACCG TTAAATCCCA ATAGCGCCAT GGCGTTATCC
ACCTCCTATT GGGAAGGTCC GATTAAACTT AGCGGTAGTC ACACCGGCAT GGGTTATATG
GAACTGACGG GGTATTAA
|
|---|
| Protein sequence | MNSRPYTITQ LKVNGLFAMS LLKCRTNARL ISQLIIGGLL LFMISGCDNA PASVSESKSM
GALLGQTKEG ETTSTQQAFA KVTPEHQFHF PQDHLAHNGF RQEWWYLTAN LTTEKGEQLG
AQWTQFRVAL KPQYTESQNA QPTTLKSAWA TEQLYFAHSA LTSSAAHLAH EKWSRGHPKL
AGVNANPYQI HLDNWQLQSE SNALFPAILR VETADFSYEL TLTSQAPLQY QGDNGYSIKN
REGNVASYYY SQPFITITGQ ITRHININGQ AENRVEKVTG QGWLDREWSS QFLTKSQQGW
DWFALRLNDG SALMLFQLRE QSTDKTQTPS AFYSARRMFA DGTGRNINSR DTPDGIKMTP
LGWQTTRTGK YPVSWQVQIP SEQIDIRISP LNPNSAMALS TSYWEGPIKL SGSHTGMGYM
ELTGY
|
|---|
| |