| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0848 |
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| Symbol | napA |
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| ID | 1168695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 869029 |
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| End bp | 871509 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342818 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | NP_716479 |
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| Protein GI | 24372437 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA GCCGCCGCGA GTTTCTCAAG GCTAACGCAG CGGTTGCCGC TGCGACGGCC
GTTGGCGTGA CGCTTCCCGT GAAAATGGTT GAAGCCGCCG AGTCAGATAA TATCAAGTGG
GATAAAGCCC CCTGCCGTTT TTGCGGTGTG GGTTGTAGCG TATTAGTCGG TACCAAAGCG
GGTAAAGTAG TTGCCACCAA AGGCGATCCA GAAAGCCCTG TTAACCGTGG GTTAAACTGT
ATTAAAGGTT ACTTCCTGTC GAAAATCATG TACGGCAAGG ACAGATTAAC CACACCATTG
CTGCGGATGA AAGACGGCAA ATATCACAAA GAAGGTGAAT TTACCCCCGT GAGCTGGGAT
GTCGCCTTCG ATACTATGGC CGCTAAGTGG AAACACAGCA TCGCCACTAA GGGCCCAACC
TCAGTCGGTA TGTTCGGTTC TGGCCAGTGG ACTATTTGGG AAGGTTACGC TGCATCTAAA
CTACATAAAG CCGGATTCTT AACCAACAAC ATCGACCCTA ACGCCCGCCA CTGTATGGCC
TCTGCGGTCG TTGGTTTTAT GCGTACCTTC GGTATTGATG AACCGATGGG CTGTTACGAC
GACTTAGAAG CCGCCGATCA CTTTGTGCTC TGGGGCGCCA ATATGGCCGA GATGCACCCG
ATCCTGTGGG CACGTTTATC TGATCGCCGT TTAAGCAGTA AAGACTGTCG CGTGCATGTG
CTATCCACCT TCGAGAACCG TAGCTTCGAT CTCGCGGATA ACCCGATGGT TTTCCATCCG
CAATCCGATC TGGTGATCCT CAACTATATC GCTAACTACA TCATTCAAAA CAAAGCGGTC
AATACTGACT TTGTGACTAA ACATACTAAG TTTGCCCTCG GTGTGGATGA TATCGGTTAT
GGTCTGCGTC CAGATCATCC GTTAGAGAAG AAGGCCAAAA ACCCTGGTAA TGGTAAATCA
ACACCTATCA GCTTTGACGA GTACGCTAAG TTCGTCAGCA CATATACGCT GGAATACGCG
GCGAAAATGA GTGGTGTGGA ACCTGAAAAA TTAGAAACGC TAGCCAAAGC CTATGCCGAT
CCTAAGGCGA AAGTCATGAG CCTATGGACC ATGGGGATTA ACCAACACGT TCGTGGTGTA
TGGGCAAACA ACATGCTCTA CAACATTCAC TTACTGACGG GCAAAATCGC AACGCCAGGT
AACAGCCCAT TCTCACTGAC AGGCCAACCT TCAGCCTGTG GTACCGCCCG TGAAGTCGGC
ACCTTCGCCC ACCGCTTACC TGCTGATATG GTGGTAGATA ACGATAAGCA TCGCGCGATT
ACCGAAAAAA TGTGGCAAGT GCCTGAAGGC ACGATTCCAC CAAAACCCGG CTACCATGCC
GTGCTGCAAA GCCGGATGCT CAAAGACGGT AAGCTAAACT GTTACTGGAC TATGTGTACC
AATAACATGC AAGCAGGCCC AAATATCAAC GAAGAAATGT ACCCAGGATT CCGTAATCCT
GAAAACTTTA TTGTGGTATC CGATCCTTAC CCAACCGTCA CAGCCATGGC AGCAGACCTT
ATTCTGCCAA CCGCCATGTG GGTCGAGAAA GAAGGCGCCT ACGGTAACGC CGAGCGCCGC
ACCCATATGT GGCATCAACA AGTCAAAGCG CCTGAAGGTG CTAAGTCAGA TCTGTGGCAA
TTAGTCGAGT TTTCAAAACG CTTTAAGGTG GCTGAAGTCT GGCCTGCTGA GCTTATCGCT
AAAAAGCCTG AATACGCTGA CAAGACGCTT TATGAAGTAC TGTTTGCCAA CGGCGTCATC
AACAAGTTCC CGACTACCGA TTGTAAGGGC GACTTAAACG ATGAAAGTGA ACACTTTAGC
TTCTATGTAC AGAAAGGCAT TTTCGAAGAA TACGCCGCCT TCGGTCGCGG CCATGGCCAT
GACTTGGCCG AGTTTGACCG TTACCACGAA ACCCGTGGCC TACGCTGGCC AGTGGTGAAT
GATAAAGAAA CCCTGCGCCG CTTCGTTGAA GGTAGCGATC CTTATGTTAA AGCGGGTGAA
GGTTACAACT TCTATGGCAA ACCCGATGGT AAAGCGGTGA TTTTCGCCCT GCCTTACGAG
CCTGCAGCGG AAGAACCAAA CTCAGAATAC GATCTGTGGA TGTCCACAGG CCGTGTGCTC
GAACATTGGC ATACCGGTTC AATGACCGCC CGCGTGCCAG AGCTTTATCG CGCTTATCCC
GATGCGCAAA TCTTTATGCA TCCAGAAGAC GCTAAGGCCC GAGGTCTGCA ACGGGGTGAT
GAAGTACTTG TCGCCTCTCC CCGTGGCGAG ATCAAAACCC GCGTCGAAAC CAAAGGCCGT
AACAAACCGC CACGCGGTGT GGTGTTTATG CCCTTCTTCG ATGCGCGTCA GTTAGTCAAC
AAGTTGATTT TGGATGCAAC CGATCCACTG TCAAAAGAAA CTGACTTTAA GAAGTGCCCC
GTAAAAGTGA TGAAGGCCTA A
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| Protein sequence | MSISRREFLK ANAAVAAATA VGVTLPVKMV EAAESDNIKW DKAPCRFCGV GCSVLVGTKA
GKVVATKGDP ESPVNRGLNC IKGYFLSKIM YGKDRLTTPL LRMKDGKYHK EGEFTPVSWD
VAFDTMAAKW KHSIATKGPT SVGMFGSGQW TIWEGYAASK LHKAGFLTNN IDPNARHCMA
SAVVGFMRTF GIDEPMGCYD DLEAADHFVL WGANMAEMHP ILWARLSDRR LSSKDCRVHV
LSTFENRSFD LADNPMVFHP QSDLVILNYI ANYIIQNKAV NTDFVTKHTK FALGVDDIGY
GLRPDHPLEK KAKNPGNGKS TPISFDEYAK FVSTYTLEYA AKMSGVEPEK LETLAKAYAD
PKAKVMSLWT MGINQHVRGV WANNMLYNIH LLTGKIATPG NSPFSLTGQP SACGTAREVG
TFAHRLPADM VVDNDKHRAI TEKMWQVPEG TIPPKPGYHA VLQSRMLKDG KLNCYWTMCT
NNMQAGPNIN EEMYPGFRNP ENFIVVSDPY PTVTAMAADL ILPTAMWVEK EGAYGNAERR
THMWHQQVKA PEGAKSDLWQ LVEFSKRFKV AEVWPAELIA KKPEYADKTL YEVLFANGVI
NKFPTTDCKG DLNDESEHFS FYVQKGIFEE YAAFGRGHGH DLAEFDRYHE TRGLRWPVVN
DKETLRRFVE GSDPYVKAGE GYNFYGKPDG KAVIFALPYE PAAEEPNSEY DLWMSTGRVL
EHWHTGSMTA RVPELYRAYP DAQIFMHPED AKARGLQRGD EVLVASPRGE IKTRVETKGR
NKPPRGVVFM PFFDARQLVN KLILDATDPL SKETDFKKCP VKVMKA
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