Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0843 |
Symbol | |
ID | 1168690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 865510 |
End bp | 866391 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342813 |
Product | LysR family transcriptional regulator |
Protein accession | NP_716474 |
Protein GI | 24372432 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCC CAATCAAGAC CTTGCAATGT TTTTTAACCC TAGTAGAAAC GGAAAACTTC ACCCGTGCCG CCCAAAAATG CTTTATCACC CAGCCAACAC TCAGCAAGAT CATCCAAAGA CTTGAAGAAA GTCTGGGAGA AACCCTGCTT ATTCGCAATA ACCAAAAAGT AGAGTTAACC CAAGCAGGGC AGCTATTTGA GCACAGTGCG CGGGAAATCC TTGGTCAATG GCATAGATTG CAGGAGGACA TGAGTAACTT AAGCGGCCTA AAATCGGGGC GGCTTAGGCT GGGCGTATGC CCTATGATGA GCAGCTTAAT CATAGGATTA CTGACGAGCT ATCGTAAGCG TTATCCAGGG GTTGAACTGC AAATGTATGA ATACGGCGGT TTCGGCTGTG AGCAGGCGCT GTTGAATAAC AGCTTAGATA TCGCCTTTAC CGCACTGCCC ACAACCCATG AGACAGAACT GATTAACCAG CCGCTAACCA AGTATCCCCT CTTAGCTTGC TTGCCTGAAG CTCATCCGCT TGCCGCTAAG TCATACCTCA GTTGGCAGGA TTTTGAACCT TACCCGTTTA TTCTCTATAA CGAGGACTTC TCGCTCGCCA AGCTGATAAA TCGTCTGAGC CGTAAGGCTG GCGTGCAATT AAATATCGCC TTTCGCAGTG GTCAATGGGA TTTTCTTGCA ACCATGGTTG AAGCCGATAT GGGACTAGCC ATATTACCCG AACCTATTTG CCAAAAACTC AGCAACAGCA AACTTGTCTT TAGACCTATG CAACCGGCCT TGACTTGGGA TTTAGCCCTG ATTTGGCGAC AGAACTTACC GTTAACTCCC GCGGCAAATG CCTTGCTGGA ATTGAGCAAA CAGAAAGCGT GA
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Protein sequence | MNIPIKTLQC FLTLVETENF TRAAQKCFIT QPTLSKIIQR LEESLGETLL IRNNQKVELT QAGQLFEHSA REILGQWHRL QEDMSNLSGL KSGRLRLGVC PMMSSLIIGL LTSYRKRYPG VELQMYEYGG FGCEQALLNN SLDIAFTALP TTHETELINQ PLTKYPLLAC LPEAHPLAAK SYLSWQDFEP YPFILYNEDF SLAKLINRLS RKAGVQLNIA FRSGQWDFLA TMVEADMGLA ILPEPICQKL SNSKLVFRPM QPALTWDLAL IWRQNLPLTP AANALLELSK QKA
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