Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0835 |
Symbol | |
ID | 1168684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 852994 |
End bp | 854151 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637342807 |
Product | hypothetical protein |
Protein accession | NP_716466 |
Protein GI | 24372424 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAAGC CCAGCCTTGT TTTTATCCTT GCCAGCGCAA TTGCCCAAAC CGCAGGTGCA GTGCAACTCC TAGGGGATGT TGAAGTGTCT CGCATTGCCA CTGCGGAAAA AACCATGGCG GAAGTGGTCA ATCGCTATCA AGCGTTGGAT GAAGGCTTAG CGTCCCAGTT ATTTGCTCAG AAAAATGAGC GCGATGCGAC CCAACTTGCC GCCCGCCAAG GTCATAGGCT GTGGCAACAA GCAGTGCGCG ATGTGCAATC AGGGCATTTT GACGACCGCT CTCTCTACTG GGCGCGACTC GCTATGCTAA ACAGCCTGAA AACCCATAAC CCCAATTTTA ATATGGCCGA TTGGCAACAA CAGATTTTGT CCAGCGCCGT CGAAAAAGCA TCACGGGGTT TTAGTGATAT TCAATATGGT GACGATGTAC AAATTAAAAT CTTCCTCACC GGCTTCGACC CTTTCTTCCT CGATAAAGAT ATCAGCCAAA GTAATCCTTC GGGTCTAACC GCCCTCGCCC TCGACGGTTT TCGATTTGAT GTTAACGGTA AAAAGGCGCA AATCGAAACC GCGATGATCC CCGTGCGCTT CGAGGATTTC GACCAAGGTA TTATCGAATC CCTGCTCAGC CCCGTTTATC GCGATCCTAA AACCCAATTG GTGTTTACGG TTAGCATGGG GCGTAGCGAC TTTGACCTTG AACGCTTCCC TGGGCGTAAC CGCAGCGCCG CTGCACCTGA TAACCAGAAT CTATATACCG GCGCCAGTAA AACCGCACCC GTTGCCCCCA AACTCAATGG CAAAGACTTT GCCGGCCCTG AGTTTGTCGA GTTTTCGCTG CCCGTAGCCG CGATGCAACT TAAAGACGGC CAGTGGAAAG TCAATGATAA CCACACGGTG ACCACCCTAG GTCGCGGTGA GTTTAATGCC AGTTCATTAA GCGAGCTGCA AAATGAAACC TCGGTCGAAG GCTCAGGTGG CGGTTATCTC TCTAATGAAA TATCCTATCG TGCTATCGTG TTACAGCAAA AATTCAATAG CCACGCACAA GTTGGCCATA TCCACACTCC AAAGGTAAAA GGCCATGACA GCGATACCGA GCACGCCATA GTCGAACATA TCCGCACTAT GGTGATGCAG GCCGCAGCGA GTCTATAG
|
Protein sequence | MLKPSLVFIL ASAIAQTAGA VQLLGDVEVS RIATAEKTMA EVVNRYQALD EGLASQLFAQ KNERDATQLA ARQGHRLWQQ AVRDVQSGHF DDRSLYWARL AMLNSLKTHN PNFNMADWQQ QILSSAVEKA SRGFSDIQYG DDVQIKIFLT GFDPFFLDKD ISQSNPSGLT ALALDGFRFD VNGKKAQIET AMIPVRFEDF DQGIIESLLS PVYRDPKTQL VFTVSMGRSD FDLERFPGRN RSAAAPDNQN LYTGASKTAP VAPKLNGKDF AGPEFVEFSL PVAAMQLKDG QWKVNDNHTV TTLGRGEFNA SSLSELQNET SVEGSGGGYL SNEISYRAIV LQQKFNSHAQ VGHIHTPKVK GHDSDTEHAI VEHIRTMVMQ AAASL
|
| |