| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0818 |
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| Symbol | metE |
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| ID | 1168669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 831267 |
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| End bp | 833549 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342792 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | NP_716449 |
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| Protein GI | 24372407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA ACAGTCTTGG TTTTCCCCGT ATCGGGCGTC GTCGTGAACT GAAGTTTGCC
CTCGAAAAAT ACTGGCGCGG TGAGAGCACC CAAGCTGAAC TGCATGAGGT GGCCAGGGAG
TTACGTCGTA CCCATTGGCA ATGGCAAGTG GCAGCGGGGA TTGAGCAAGT GCCAGTAGGG
GATTTTGCCT TTTACGATCA AGTATTAACC CTGAGTGCGA CCTTAAACGC TATTCCAGAT
CGTCACCGCG GCGAGGGCGC AATCGATCTT GATACCTTAT TCCGTGTTGC CCGTGGCCGT
GCACCAACCG GCACCGATGC GCCAGCCTCG GAAATGACTA AGTATTTCAA CACCAACTAT
CACTACTTAG TGCCAGAGCT TAAGCAAGAC CAAGTGTTCT CTATCGCCTA TGAGCAGTTT
TTTGATGAAG TGGCCGAGGC CCAGGCGCTG GGTTATAAAG CCAAGCCCGT ATTGTTAGGC
CCTGTGAGTT ACTTGTATCT GGCCAAAACC GTGGGTCAGG ATTTTGATAA ACTCAGTTTA
TTGCCAAATC TTTTAAAAGC TTATGCTGAG ATTCTTGCGC GTTTTGCTGC GCAGGGAGTG
ACTTGGGTTC AACTTGAAGA ACCAATCCTC GCGCTCGAAT TAACTCACGA GTGGCAAGCG
GCGATTAGCG AATCTTATCA AGCGCTTAAA ACGGCTCAAG TAAAGATTTT ACTCACCAGC
TACTATGGCA GCATTAGCCA TCATCAGGCG CTGGTTTCCG CGCTGCCAGT GGCGGGTCTG
CACCTAGATT TAGTGACTGC CCCTGAGCAA TTAGCTTTGT TTGCTAATGC CTTAAGACCA
GATCAAATTT TGTCAGTTGG CGTAGTTAAT GGCCGTAACG TGTGGGCGGC TGAAGTTGAC
CTGATTGTCG AGCGTATCGG CAGCGTTGCC AGAGACTTAT GCTCACAAGA CGGATCGCGC
CTATGGATTG GCACCTCCTG TTCATTGCTG CACAGCCCTG TGGATTTAGA GGTGGAGACA
ACGCTCGCGC CGACGCTACG TCAGCAGCTT GCGTTTGCTA AGCAAAAGCT GCTGGAACTG
GCTAATGTGC GCCAATTGTT GCAGGCCCCT GAGTCTGTCG CGGCCAAAGA GATAGTTAAC
ACCTGTTTGG CCCGCCGTGA GGCCAAGGCG CAGGCGGCGG ATGCTAAAGT AATCGCCCGT
GTTGCTGCGC TGACCCCAGC CGACTATGAG CGTGTGAGCG AATTTACTGA GCGCCAAGCG
GTGCAGCAGC GCAAGTATCG TTTGCCATTG CTGCCAACGA CCACGATTGG CTCATTCCCA
CAAACACCGG CAATCCGTGG TTTACGCAGT CGCTGGCGCA AAGGTGAGTT AAGCGATGCC
CAATATACCG AGCAGTTGCA GCAAGTGACT CGCGATACTA TCGACCGCCA ACTCAAACTC
GGTATCGATG TGCTGGTACA CGGTGAGGCC GAGCGTAATG ACATGGTGGA ATACTTCGGC
GAGCAGCTCG AAGGTGTGGG CTTTACCAAA AATGGCTGGG TACAGAGTTA TGGTTCTCGC
TGCGTGAAGC CGCCATTGAT TTATGGTGAT GTGAGCCGCC CGAAAGCCAT GACGGTTGAT
TGGGCTGTAT TTGCCCAAAG CCTGACGGAC AAACCTGTCA AAGGTATGTT AACGGGCCCT
GTGACGATTC TACATTGGTC GTTCGCCCGT GAAGATATCA GCCGCGATAC CATTGCCACC
CAATTGGCGC TGGCAATTCG TGATGAAGTG GTGGATTTAC AACATGCGGG CATTGGCATT
ATTCAAATTG ATGAGCCAGC CTTCCGCGAA GGTCTGCCAT TAAAACAAAG TGAGTGGCAG
GCTTACTTAG ATTGGGCGGT CAATGCCTTT AAACTGAGTG CGGCAGGTGT GGTGGATGAA
ACCCAAATCC ACACTCATAT GTGCTACAGC GAGTTTAACG ACACGATTGC CGCAATTGCC
GCCATGGATG CTGACGTCAT CACTATCGAG ACTTCGCGCT CACGCATGGA GCTACTCAAC
GCCTTTGAAG ATTTTGAATA TCCAAATGAA ATTGGCCCTG GCGTTTACGA TATCCACTCG
CCCAATACCC CAAGTGTTGA GGCTATGGTG CACCTTATCG AAAAAGCGGC GCAAAAAGTG
CCAGTGCGCC AACTGTGGGT TAACCCCGAT TGCGGCCTTA AGACCCGCAC TTGGGATGAG
GTAGAACCCG CACTGAAGAA CATGGTGGAT GCGACCCGCG AACTGCGTCG CCGCCTCGGC
TAA
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| Protein sequence | MQLNSLGFPR IGRRRELKFA LEKYWRGEST QAELHEVARE LRRTHWQWQV AAGIEQVPVG
DFAFYDQVLT LSATLNAIPD RHRGEGAIDL DTLFRVARGR APTGTDAPAS EMTKYFNTNY
HYLVPELKQD QVFSIAYEQF FDEVAEAQAL GYKAKPVLLG PVSYLYLAKT VGQDFDKLSL
LPNLLKAYAE ILARFAAQGV TWVQLEEPIL ALELTHEWQA AISESYQALK TAQVKILLTS
YYGSISHHQA LVSALPVAGL HLDLVTAPEQ LALFANALRP DQILSVGVVN GRNVWAAEVD
LIVERIGSVA RDLCSQDGSR LWIGTSCSLL HSPVDLEVET TLAPTLRQQL AFAKQKLLEL
ANVRQLLQAP ESVAAKEIVN TCLARREAKA QAADAKVIAR VAALTPADYE RVSEFTERQA
VQQRKYRLPL LPTTTIGSFP QTPAIRGLRS RWRKGELSDA QYTEQLQQVT RDTIDRQLKL
GIDVLVHGEA ERNDMVEYFG EQLEGVGFTK NGWVQSYGSR CVKPPLIYGD VSRPKAMTVD
WAVFAQSLTD KPVKGMLTGP VTILHWSFAR EDISRDTIAT QLALAIRDEV VDLQHAGIGI
IQIDEPAFRE GLPLKQSEWQ AYLDWAVNAF KLSAAGVVDE TQIHTHMCYS EFNDTIAAIA
AMDADVITIE TSRSRMELLN AFEDFEYPNE IGPGVYDIHS PNTPSVEAMV HLIEKAAQKV
PVRQLWVNPD CGLKTRTWDE VEPALKNMVD ATRELRRRLG
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