| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0806 |
|---|
| Symbol | |
|---|
| ID | 1168658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 817728 |
|---|
| End bp | 819494 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637342781 |
|---|
| Product | alkaline phosphatase, putative |
|---|
| Protein accession | NP_716437 |
|---|
| Protein GI | 24372395 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA CCGTGACTCG TCGTGATTTT TTAGCAATAT CGGCTAAAGG TATTGGCGCT
GCAGTGATCT CCTACGGCCT AATGGGATGT AGCAACAGTG ATGATGATAA CTCTGTTCCT
GCACAGTTTT TACATGGGAT TGCCAGTGGC GATCCCATGC AGGATGCGGT GATCCTTTGG
ACTCGTGTGA CGCCTGATTC TGCTGGGGAT GTTAAAGTCA GTTGGCAAGT GGCGAGTGAT
GCAGCGTTCT CCCAATTAGT GACGACTGGG GAGATGGTCA CTAATGCTAA TCGTGATTAC
ACCGTTAAAG TTGATGCCCG CGGTTTACGT GCAGGGCAAA ACTATTTTTA CCGCTTTATG
ACGGGTGACA AAACCTCCGT CGTGGGTAAA ACCCGCACGT TACCCGAGGG TGAGGTGAGT
TCAGTCAAGT TAGCCGTAAT GTCCTGCGCT AACTTCCCTG CAGGTTATTT TAACGTATAT
GAATTGGCTG CGGCGCAGAA TGATCTGGAT GCTGTGGTGC ATCTTGGTGA CTACATTTAC
GAATATGCCC GCGGCGGTTA TGCCAGTGAA AATGCGGCAA AGCTGGGGCG TGAAGTGTTA
CCCGCCAATG AGCTGCTGTC ATTAAGCGAT TACCGTACCC GTTATGGCCA ATACCGTTCG
GATAGCAGTT TGCAAAAACT GCACGCTAAA GTGCCTTTTA TTACGGTATG GGACGACCAT
GAAGTGGCAA ACGACACTTG GCGTGATGGC GCAGAGAATC ATAACGAAGG TGAAGGGATT
TTTGCTGCAC GCAAAGAAGC GGCGTTGCAG GCTTATTTTG AATGGCTGCC GATTCGTCCA
TGGCGTGAGG GGAACCATGA GGAGATTTAC CGCAGCTTCA GTTACGGCAA TCTGGTCGAT
TTGCACATGC TTGATACGCG CGTTTTGGCC CGCGATAAAC AGCTCGACTA TGCCGATTAT
ATGGATGCCA CCACGGGCGC CTTCGATGGT GAGCGTTTCC GCGCCGATGT GACATCCACT
TCTAGAACCC TATTAGGATT AACTCAGTTG CTTTGGTTAC AGGGCACCTT ATTGCAAGCC
ACGGGCACTT GGCAGGTGTT GGGTCAGCAA ATTTTGATGG GTAAGATGTC GCTACCCGCT
GCAATCGCAA CCCAGCAGAT GAGCATTCCC CAATTTGCCA TGTTAGGTGC GCTGGCGAAG
TTAGCGGCCC GTGCTGCAGC AAATGATCCG ACGTTAACTG CCCAAGAGTT GCAGTATTTA
CAAGCTAATC AAGCCCTATT AACGCCCGAG GTGATTGCCC TGCTGCAACT CCCAGCGATT
CCCTATAACT TAGATGCGTG GGATGGTTAT GCCTATGAAA GAGAAGTCAT TCTAGGTACG
GCTAAATCGA AAAATCACAA CCTGGTGGTG ATCGCCGGTG ACACCCATAA CGCGTGGGCG
AATGAGTTAA AAGATGTTAA TGGCAATACC GTTGGGGTGG AGTTTGCTAC GAGCTCAGTG
TCATCACCGG GATTGGAATA CTACTTAAAT CTGCCTGCGG AGCAGATCCC CGCGACCGAG
GCGGCGATTG TCGATCTGGT GCCGGATCTT CAATACACTA ACCTAAAAGA CCGCGGTTTT
ATGACCTTAA CCTTCACCAA AGACGCTGTG CGTAGCGACT GGCATTATGT CAGCACGATT
CTGACGAAGG AGTTTGAAGA AGCCAGCTCT CGCCGCTTCA GCGCCATAAC CAAGGTTGGT
AAACCTAGTA TCAACCCTGT GAGCTAA
|
|---|
| Protein sequence | MKRTVTRRDF LAISAKGIGA AVISYGLMGC SNSDDDNSVP AQFLHGIASG DPMQDAVILW
TRVTPDSAGD VKVSWQVASD AAFSQLVTTG EMVTNANRDY TVKVDARGLR AGQNYFYRFM
TGDKTSVVGK TRTLPEGEVS SVKLAVMSCA NFPAGYFNVY ELAAAQNDLD AVVHLGDYIY
EYARGGYASE NAAKLGREVL PANELLSLSD YRTRYGQYRS DSSLQKLHAK VPFITVWDDH
EVANDTWRDG AENHNEGEGI FAARKEAALQ AYFEWLPIRP WREGNHEEIY RSFSYGNLVD
LHMLDTRVLA RDKQLDYADY MDATTGAFDG ERFRADVTST SRTLLGLTQL LWLQGTLLQA
TGTWQVLGQQ ILMGKMSLPA AIATQQMSIP QFAMLGALAK LAARAAANDP TLTAQELQYL
QANQALLTPE VIALLQLPAI PYNLDAWDGY AYEREVILGT AKSKNHNLVV IAGDTHNAWA
NELKDVNGNT VGVEFATSSV SSPGLEYYLN LPAEQIPATE AAIVDLVPDL QYTNLKDRGF
MTLTFTKDAV RSDWHYVSTI LTKEFEEASS RRFSAITKVG KPSINPVS
|
|---|
| |