| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0802 |
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| Symbol | |
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| ID | 1168655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 814692 |
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| End bp | 816053 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342778 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_716433 |
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| Protein GI | 24372391 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCACAT CAGCTAAAAC CCTGCAACAA CGCATGGGCA TCATCGCCCT CACTTGGCCG
ATTTTTATCG AAACCTTGCT GCAATCCTTA CTCGGGATCA GCGATATTTT TATGCTGAGC
CATTATTCCG ATAATGCGGT TGCAGCAGTT GGACTCACCA CCCAATTGAT GTTTTTTATG
ATGGTGATGT CGATGATGGT TAGCACGGGC GCCAGTATTC TGATCAGCCA AAATAATGGT
GCAGGCCGAA CCCAAGAGGC GACCGATATT GGTGTCGCCA GTGTGGCGTT AAGTTTAGGT
TTAGCGGTGG TGATGGGCGC TGCGATGTTT TTTTGTGCCC ACGGCATTAT CGGTTTATTT
GAGTTAGAGC CTAAGGTTGC GGGCTATGGT TACGACTATC TGCTGATCTG CGGCAGTTTG
AGTATCGGGC TGGTGATGAA CATCGCCTTT GCCGCCATCT TACGTAGTTA CGGTTTTACT
CGCTCGGCTA TGTTGGTCAC ATTGAGCACG GGGTTGATGA ATGTGCTCGG TAACTATATT
GCCCTTTATT CTCCCTTTGG TTTGCCGGTT TATGGAGTCA CTGGGGTGGC GATTTCTACT
GTGACCAGCC AGCTGATGGG TGCCTTGATT ATGCTGGCTG TGATCCGCAG TAAGCATATT
CCGCTACCGA TGCAGCGGCT TAACTCACTG CCGCGCAGCA CCTATTGGAG CGTGATGCGC
ATTGGCTTGC TCAATGCGGG CGAAATGCTG TCCTACAATG TGGCGCAGAT GACGATTATT
TATTTTATCA GTCAGATGGG CACGCTCTCT TTAACTGCTT ATACCTATGG CTTGAATATC
AGCCGCTTTA TTTACTGTTT TTCGGTGGCA TTGGGGCAGG CGGCGCAGAT CCAAACTGGT
TACTACGTGG GCAAACAATG GTTTGATGAG ATAACGGTGC GGGTGCAAAA GTATTGCCTC
GTGGGCTTTA TCGTCTCCCT TGCCATAGTG CTAATCTTTT TTTGGCAGCG TTTTACCATT
GTGGGTTGGT TGAGTGAAAA TCCTGAAGTG ATTCAACTCA CCGCATTACT CTTATTAGGT
TCAATCGCGC TGGAAACTGG GCGAGTGTTT AATCTGGTGA TTATTTCGGC GTTAAAAGGC
GCAGGAGATG TGGCGTTTAC GGTGCGAGTC GGGCTATTTA GTATGTGGGG CATTGGCGTG
CTTCTGGCTT GGTTTTTTGG CTTGTACTTA GGTTATGGCG TGCTTGCCGC TTGGCTTGCC
GTTGCGGCCG ACGAGTGGGT GCGAGGATTG ATTATGGTGC AACGTTGGCG CTCGGGTCGC
TGGCAGCGTT TTACCCGTAT TCCGCCAGCA ACTTCAGCTT AA
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| Protein sequence | MATSAKTLQQ RMGIIALTWP IFIETLLQSL LGISDIFMLS HYSDNAVAAV GLTTQLMFFM
MVMSMMVSTG ASILISQNNG AGRTQEATDI GVASVALSLG LAVVMGAAMF FCAHGIIGLF
ELEPKVAGYG YDYLLICGSL SIGLVMNIAF AAILRSYGFT RSAMLVTLST GLMNVLGNYI
ALYSPFGLPV YGVTGVAIST VTSQLMGALI MLAVIRSKHI PLPMQRLNSL PRSTYWSVMR
IGLLNAGEML SYNVAQMTII YFISQMGTLS LTAYTYGLNI SRFIYCFSVA LGQAAQIQTG
YYVGKQWFDE ITVRVQKYCL VGFIVSLAIV LIFFWQRFTI VGWLSENPEV IQLTALLLLG
SIALETGRVF NLVIISALKG AGDVAFTVRV GLFSMWGIGV LLAWFFGLYL GYGVLAAWLA
VAADEWVRGL IMVQRWRSGR WQRFTRIPPA TSA
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