Gene SO_0779 details

Gene Information

• Locus tag: SO_0779
• Symbol: gcvT
• ID: 1168634
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 791897
• End bp: 792991
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637342757
• Product: glycine cleavage system aminomethyltransferase T
• Protein accession: NP_716410
• Protein GI: 24372368
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
• TIGRFAM ID: [TIGR00528] glycine cleavage system T protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAATA AAACTGTTCT TTTTAACAAG CACTTAGAAT CAAACGCTAA GATGGTCGAC 
TTCCACGGTT GGGATATGCC CCTCAACTAT GGTTCACAAA TCGAAGAACA CCATGCCGTG 
CGTCAAGACG CAGGTATGTT CGACGTATCC CACATGACTG TAGTTGATGT GACCGGAACC 
GACGCTTGTG CATTCCTGCG TAAGTTGCTC GCCAACGATG TGGCCAAACT TAAAGTTCCT 
GGTAAAGCCT TATACGGCGG CATGTTAGAT GACAATGCCG GCATCATCGA CGATCTCATC 
ACTTACTACC TCACCGACAC TTTCTACCGT GTTGTTGTCA ACAGCGCGAC CCGCGAAAAA 
GACTTAGCCT GGATCGCCAA ACAATCCCAA GGTTTTGATG TCACAGTGAC CGAGCGTCCT 
GAGCTGGCGA TGATCGCCGT TCAAGGTCCT AACGCTAAGG CCAAAGCCGC CGCCGTATTC 
AGTAGCGAGC AAAATGCCGC CATCGAAGGC ATGAAACCCT TCTTCGGTAA GCAAGCGGGT 
TCACTGTTTA TTGCGACCAC AGGTTACACA GGTGAAGCGG GCTACGAGAT TATCGTGCCA 
GAAACTGAAG CCGAAGCACT GTGGCAAGCA CTGTTAGATC AAGGCGTTAA ACCTTGTGGT 
TTAGGCGCTC GCGATACATT ACGTCTCGAA GCTGGTATGA ACCTCTACGG CTTAGATATG 
GATGAAACCA TCAACCCACT GGCCGCCAAC ATGGGCTGGA CCATCGCATG GGAGCCCACC 
GACCGTGACT TTATCGGCCG CAAGGCGCTT GAAGCATTGC GCGATGCGGG AACCGACAAA 
TTAGTCGGTC TAGTGATGGA AGAAAAAGGC GTGTTACGCC ATGATATGCC AGTATTTTTC 
ACCGATGCAG CGGGTGTTGA GCAGCAAGGC GTGATCACTA GCGGTACTTT CTCACCCACA 
TTGGGCTATT CTATTGCGAT GGCGCGTGTT CCTAGTTCAA TTGGGGATAC TGCGGAAGTC 
GAGATGCGTA AAAAGCGCGT GGCTGTTAGA GTAGTAGCGC CAAACTTTGT GCGCAACGGT 
AAACAAGCAT TTTAA 

 

Protein sequence

MANKTVLFNK HLESNAKMVD FHGWDMPLNY GSQIEEHHAV RQDAGMFDVS HMTVVDVTGT 
DACAFLRKLL ANDVAKLKVP GKALYGGMLD DNAGIIDDLI TYYLTDTFYR VVVNSATREK 
DLAWIAKQSQ GFDVTVTERP ELAMIAVQGP NAKAKAAAVF SSEQNAAIEG MKPFFGKQAG 
SLFIATTGYT GEAGYEIIVP ETEAEALWQA LLDQGVKPCG LGARDTLRLE AGMNLYGLDM 
DETINPLAAN MGWTIAWEPT DRDFIGRKAL EALRDAGTDK LVGLVMEEKG VLRHDMPVFF 
TDAAGVEQQG VITSGTFSPT LGYSIAMARV PSSIGDTAEV EMRKKRVAVR VVAPNFVRNG 
KQAF