Gene SO_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0742 
Symbol 
ID1168598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp759472 
End bp760521 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID637342721 
Productiron(III) ABC transporter, ATP-binding protein 
Protein accessionNP_716373 
Protein GI24372331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTA CGCTCAATCT TCATCAAGTT CATAGCGATT ATCAGGGCCA ACAGATACTC 
AAAGGCTTAG ATTTGACGCT GGCACAGGGG GAAATTCTTG CGCTGCTCGG CCCAAGCGGT
TGTGGCAAAA CGACTTTGCT CAGGGCGGTG GCAGGCTTGC AGGCGATTAG CCAAGGGGAG
ATCCAAATCA ATGGCAAAAC CGTCAGCGGC GCCGGGCAGT TTGTGCCGAG TGAACAGCGC
GGCATAGGGA TGATTTTTCA AGACTATGCA CTGTTCCCGC ATTTAACCGT GGCCGAGAAT
ATTCTGTTTG GTGTCGCTAA GTTAACGACG GCGCAGCGTA AGGCCCGTTT AGATGACATG
CTCGCCTTAG TTAAACTCGA AGGCTTAGCC AAGCGTTATC CCCACGAGTT GTCAGGTGGT
CAGCAGCAGC GGGTATCGAT TGCACGCGCT TTGGCCTATG AGCCGCAATT ACTGTTACTC
GACGAGCCTT TTTCGAATAT TGATGCGCAA GTTCGCCACA GCATGATGGC GGAGATCCGC
AGCATTCTAA AGCAGCGTAA TGTCAGTGCG GTTTTTGTTA CCCACAGTAA GGATGAAGCC
TTTGTGTTCG CCGATACTTT GGCCATTTTT AGCCAAGGTG TAATAGTACA ACATGGCCGA
GCAGAAGACT TGTATGCCGC GCCGAATAGT CGCTATGTGG CTGATTTTCT AGGAAGTGGT
AACTATTTAC CCGCTGAGGT TGTTGATGGC CACAGTGTGA CAACGCCTAT TGGCCAATTG
CGTAGCCTCA CGCCATTGTC GCAATCACAC GCCTTTAATG GGCAAGTGTT TTTGCGGCCA
CAACAATTGG CGCTCAGTGC TGATGATGCA GGCGTTGGGA CTATTACCGA GCGGCGCTTC
CTCGGCGCAT TTTGCCATTA TTGGGTGAAA GTGGAGGCGG CATCCCACGC TTATTATTTA
GAAGTGCGTA GTCAAATCAT GCAGTTCAAT GTTGGCCAAC GAGTGGGTTT AAGCACTGAG
CCGCATTCTC TCGTGTTATT CGAATCTTAG
 
Protein sequence
MTSTLNLHQV HSDYQGQQIL KGLDLTLAQG EILALLGPSG CGKTTLLRAV AGLQAISQGE 
IQINGKTVSG AGQFVPSEQR GIGMIFQDYA LFPHLTVAEN ILFGVAKLTT AQRKARLDDM
LALVKLEGLA KRYPHELSGG QQQRVSIARA LAYEPQLLLL DEPFSNIDAQ VRHSMMAEIR
SILKQRNVSA VFVTHSKDEA FVFADTLAIF SQGVIVQHGR AEDLYAAPNS RYVADFLGSG
NYLPAEVVDG HSVTTPIGQL RSLTPLSQSH AFNGQVFLRP QQLALSADDA GVGTITERRF
LGAFCHYWVK VEAASHAYYL EVRSQIMQFN VGQRVGLSTE PHSLVLFES