| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0730 |
|---|
| Symbol | |
|---|
| ID | 1168585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 743954 |
|---|
| End bp | 746044 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637342710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716363 |
|---|
| Protein GI | 24372321 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAT TGTTCTCTAC TCTGACTACA TCGACTTACG ATTGGAGTAT AGATTTTAAA
AAAAAGAAGG ATTTTATAGC GGTAGCTAAC GAAATAGGTT ACACCTTCAC TTCTTCTAAA
ACGACTAATG AAGTATCGGA CTTTATAAAG AGAAAAGTAG TATCGTTATT AACTTCAAAC
GAATGTCCTT ACGAAGATTA CATCACGGTT TTCAATCAAT TCTCGTATGA TTTCTATTGT
AAAAATAAAA ATCCTAATGA ATTCAGGTTT CTTGCTTTCC TCAGATCCTT TTTAAATTTT
CTAGATGGAT ATACCATCAA CGAACAAAAA TGGATAGAGG CACATAAACT TATACAGAAT
TACATTTATA TGGCTAATCA TAATACTCAA GATTTATCTT TAAATGAAAA ATACAAAATA
GTATCAGAAG CATTTAAAAG ATTCAGAAAA AAAGGAATCA AGGTTGATAT AATCGAAGGT
AAAATTCACA TAAGCGATGA TCAATTCAAC AATATTCTGC AAAGAATCGA TTTTAGAGCA
AAAAAAGTAG GTGACAAACT TTATCAGGAT ATTCTTGCAA GGATTAAATC ATGCTATACA
AGAAAGCATG ATAGATTTTA CTTGAGGAAA GAGTTACATC CAACAAACTC TCAGCCAGAG
CCAAATATTC CTTTGGGTTA CCTTTATAAT CTGTCCATAA AGAATTTGAA TACAGTAAAG
AATCATCAAG CAAAAATCCA AATATCAGAG ATTATTGAGT TATCGACAGA TCTAATGACA
ATATTAGAAC TACAATGGTT ACATCCATAC GAAAGCTTGC TTTCAGGCCA AGATATAATC
CCTTATTTGC GAAAGAACTT ATTGCACGAT GAACTATTTA CTATTCATCA GTATAGTAAT
AGTAATGCCA GAAAAATAAT CAATGGCATG TTCAATAATA AGCATAACGC CAAAATACCA
AAAGAGATAG ATTTAAGCAT TTACATTGAT ATTTTTGATA TAGTAAATAC AACGCCGAGT
ATTGATATAC AGTCCATAGA AAAAGTAGAA TTATATTCTC ACTTACTAGG AAGATATACA
GAAAATGAGA TACAAAGCGC ATTAAGTGAA TTGTGTATAG AAGAAAGTCA AGTAAATAAA
GGCTATCTAA ATCCTTTCGA CATAAATACA ATAAACTACT ATGAAAAACC ATTTATTAAA
AATAATGAAA ACATTACTTA TTTAAACTCA TATTTTCATA ACGATGGATT TGTGTGTTTT
TTTAGGGATA AGCTGGAACA TGAATGCGCT AAAATTGGCA TAGCAGGGAA AAATTTTAAC
AAATTGCGTG GTGATATATC AGAAGAATTT ATAAAAAACC TATTAAACGC AAAAAAAATA
TCTCACAAAT CTGGATTAAA GTACAAAGTT AAAAAAAATA TTTTTCAAGA TATTAGCTCA
GATTCAGATG GTGGTGAATG TGACTTTATT ATTGAAACTG AAGATAGAAT CATCTTCATT
GAAGAAAAAT CTAAAGAATT GGACATTGAA TCAAAAAGCG GAGATATCTT ACCAGGACTG
TGGGATTTAG CTTTATCACT GCTCAAGTCT CAAGAGCAAA TTTGTAGGCA TGAATATTTA
CTTAGAAAAC AAGGGAAAAT TGAATTTGAG AATGGGTTCA CTCTTGAATT GAAAGACAGA
AAAATTGAAA AAGTGTCTTT GACACTCTTC GATTTTTATA GTCTCGCAGA TGTTAACAGC
GTTAGAAGTA TTCTGATATC ATGCATCAAT TCAACTATTA GTAGTACTGA TAACGACCCG
AAAGTAACCG AGAAGATTGA AACGATAAAT AAAATATTTA GAAAACTACA AAATATTTAC
AAGAGTGATA TATTTAAAAA CGAATACATC AACCCAGACA ATTCACTCAA TACTCTAAAC
AGCCGATTCT TTAGCTCAAA TCAACTAATT ACAATGTTAG ATCATTGCTC AGGCAACGAA
GATTTTCTCA GCATAATGAA TAAAACAAAA GCTGTTGGTA ACAACAGCCA AGACTGGTTT
TTGATCTTCA ACTATTTTGC AATAGATTTA TACAAGAATA AGAATAAATA A
|
|---|
| Protein sequence | MNQLFSTLTT STYDWSIDFK KKKDFIAVAN EIGYTFTSSK TTNEVSDFIK RKVVSLLTSN
ECPYEDYITV FNQFSYDFYC KNKNPNEFRF LAFLRSFLNF LDGYTINEQK WIEAHKLIQN
YIYMANHNTQ DLSLNEKYKI VSEAFKRFRK KGIKVDIIEG KIHISDDQFN NILQRIDFRA
KKVGDKLYQD ILARIKSCYT RKHDRFYLRK ELHPTNSQPE PNIPLGYLYN LSIKNLNTVK
NHQAKIQISE IIELSTDLMT ILELQWLHPY ESLLSGQDII PYLRKNLLHD ELFTIHQYSN
SNARKIINGM FNNKHNAKIP KEIDLSIYID IFDIVNTTPS IDIQSIEKVE LYSHLLGRYT
ENEIQSALSE LCIEESQVNK GYLNPFDINT INYYEKPFIK NNENITYLNS YFHNDGFVCF
FRDKLEHECA KIGIAGKNFN KLRGDISEEF IKNLLNAKKI SHKSGLKYKV KKNIFQDISS
DSDGGECDFI IETEDRIIFI EEKSKELDIE SKSGDILPGL WDLALSLLKS QEQICRHEYL
LRKQGKIEFE NGFTLELKDR KIEKVSLTLF DFYSLADVNS VRSILISCIN STISSTDNDP
KVTEKIETIN KIFRKLQNIY KSDIFKNEYI NPDNSLNTLN SRFFSSNQLI TMLDHCSGNE
DFLSIMNKTK AVGNNSQDWF LIFNYFAIDL YKNKNK
|
|---|
| |