Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0704 |
Symbol | groEL |
ID | 1168564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 721019 |
End bp | 722656 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342689 |
Product | chaperonin GroEL |
Protein accession | NP_716337 |
Protein GI | 24372295 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTA AAGAAGTTGT ATTTGGTAAC GACGCACGCG TAAAAATGCT GGCTGGTGTA AACATTCTGG CTAACGCAGT AAAAGTGACC TTAGGCCCTA AAGGCCGTAA CGTGGTATTA GACAAGAGCT TTGGCTCACC ACTGATCACT AAAGACGGTG TGTCTGTTGC AAAAGAAATC GAATTAGAAG ACAAATTCGA AAACATGGGC GCGCAAATGG TGAAAGAAGT TGCTTCTAAA GCCAACGACG CCGCCGGTGA CGGTACCACT ACTGCAACTG TTCTGGCACA AGCCATTGTA ACTGAAGGCT TAAAAGCCGT TGCAGCGGGT ATGAACCCAA TGGACTTAAA GCGCGGTATC GATAAAGCCG TGATTGCCGC CGTTGCTGAA CTGAAAAACC TGTCTCAAGA TTGCGCTGAC TCAAAAGCGA TCGCTCAAGT TGGTACTATC TCTGCAAACT CTGACGAGTC AATCGGCCAA ATCATTGCCA CTGCAATGGA AAAAGTCGGC AAAGAAGGCG TGATCACCGT TGAAGAAGGC CAAGCACTGG AAAACGAACT GGACGTAGTA GAAGGTATGC AGTTCGACCG TGGCTACCTG TCTCCATACT TCATCAACAA GCCAGAAACC GGCAGCGTTG AATTAGATCA CCCATTCGTA CTGTTAGTAG ACAAGAAAAT CTCTAACATT CGCGAACTGT TACCTATCCT TGAAGGTCTG GCAAAAACCG GTAAGCCATT ACTGATCGTT GCCGAAGACG TTGAAGGTGA AGCCTTAGCA ACGCTCGTTG TTAACAACAT GCGCGGTATC GTGAAAGTGG CAGCGGTTAA AGCCCCAGGC TTTGGTGACC GTCGTAAAGC CATGCTGCAA GACGTAGCGA TTTTAACTGG CGGTACTGTT ATCGCTGAAG AAATCGGCCT AGAGCTTGAA AAAGCAACCC TAGAAGATTT AGGTACTGCT AAGCGTGTTG TTATCACTAA AGACAACACC ACCATCATCG ATGGTAACGG CGAACAAGCG CAAATCGAAG CGCGCGTAAG CCAAATCAAG CAACAAATCG AAGAATCAAC TTCAGACTAC GACAAAGAAA AACTGCAAGA GCGTATGGCT AAATTAGCTG GCGGTGTTGC GGTAATTAAA GTCGGTGCAG CGACCGAAGT TGAAATGAAA GAGAAAAAAG CTCGCGTAGA AGACGCACTG CACGCAACCC GTGCTGCGGT TGAAGAAGGC GTGGTACCTG GCGGCGGTGT AGCACTTATA CGTGTTGCCT CTAAGATTGC TGACGTTGAA GTGGCTAACG AAGACCAAAA ACACGGTGTG GTTATCGCCT TACGTGCAAT GGAAGCGCCA CTGCGTCAAA TCGCGACCAA CGCAGGCGAA GAAGCCTCTG TTGTGGCTAA CAACGTGAAA AACGGCAGCG GTAACTACGG TTACAACGCG GGCAACGACA CCTACGGTGA CATGTTAGAA ATGGGTATCC TTGACCCAAC TAAAGTGACC CGTAGCGCAC TGCAATTCGC AGCGTCTATC GCAGGCCTGA TGATCACCAC CGAAGCAATG GTCGCTGAGC TGCCAAAAGC TGATGCGCCA GATATGGGCG GAATGGGTGG TATGGGCGGA ATGGGCGGCA TGATGTGA
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Protein sequence | MAAKEVVFGN DARVKMLAGV NILANAVKVT LGPKGRNVVL DKSFGSPLIT KDGVSVAKEI ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQAIV TEGLKAVAAG MNPMDLKRGI DKAVIAAVAE LKNLSQDCAD SKAIAQVGTI SANSDESIGQ IIATAMEKVG KEGVITVEEG QALENELDVV EGMQFDRGYL SPYFINKPET GSVELDHPFV LLVDKKISNI RELLPILEGL AKTGKPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DVAILTGGTV IAEEIGLELE KATLEDLGTA KRVVITKDNT TIIDGNGEQA QIEARVSQIK QQIEESTSDY DKEKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALI RVASKIADVE VANEDQKHGV VIALRAMEAP LRQIATNAGE EASVVANNVK NGSGNYGYNA GNDTYGDMLE MGILDPTKVT RSALQFAASI AGLMITTEAM VAELPKADAP DMGGMGGMGG MGGMM
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