Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0693 |
Symbol | galM |
ID | 1168553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 709746 |
End bp | 710777 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342678 |
Product | aldose 1-epimerase |
Protein accession | NP_716326 |
Protein GI | 24372284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCGTT TCAGTGTATT AGATCCTTGG ACCGATCCCC GTGGCGGCGA AATAGAACGT GTGCGGATAG ACAATGGCAT CATCGCCTTG GAAGTGCTCA GTTTAGGCGG CATCATTCGC GCGCTTTGGA CGCCCGATAA ACAGGGTGAG CGTGCCAATA TCGTTCTAGG CTGCGACAGT GCCGAAGATT ACCTGACTCA AAATGCCCAC CTTGGCGCCA TTGTAGGCCG CTTTGCTAAT CGTATCGCCC TTGGCAAGCT GCAACATCAG GGGCAAACCT ATCAACTGGA TATCAATCAA GCGAGCAACT GCTTACATGG TGGCCGCGAA GGTTTTAACA GAAAGAACTG GCACTTAGGC CAACTTCCCG ACGGGGTAAG ATTATCTTTA GTTAGCCCTG ATGGCGATAT GGGCTTCCCC GGTAATTGCA CGGTGCAATT AGACTATCGC CTTGCCGCCA ATAATCTCTA TGTGGAAATA CTGGCCTCCG TGGATAAACC TTGTCCGGTG AGCCTGACTC AGCACAGCTA TTTTAATCTT GATGGCACTA GCAATAATCA TCAGCACCAG ATTCAAATCG ATGCCACACG CTATTTGACG ATGAACGAAG TCGGCATCCC TATGGGAATT GCCGAGGTTA AAGACAGTAT TTTCGATTTA ACTCAAGGTG TTACCCTTGG AGAAAAACTC CATGACCCCA CATTAGCAAG CACTCGAGGA TATGATCATT GTTATCTTAT GGATAATCTC GATGGCTCGC TACGCCGCTT TGGTTGTTTA AGCAGTCCAG TGAGCGGCCG TGCCATGACG GTATTTACCA ATCAGCCCGG TGTGCAGCTC TATTGTGCGA ACTTTTTAGC CGGCACGCTA GGGCGAAATC AGCAACGCCT AAATCAATAT CAAGGGGTGT GTATTGAGCC TCAAATGCTG CCTGATTCGC CGAATCAAAC CCAATTAGGC CAAGATGTGT GGTTAGTGCC GGGTAAAATT TACCATCACA TTAGTCGCTA TCAATTTGAT ACTGAAAGCT AA
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Protein sequence | MVRFSVLDPW TDPRGGEIER VRIDNGIIAL EVLSLGGIIR ALWTPDKQGE RANIVLGCDS AEDYLTQNAH LGAIVGRFAN RIALGKLQHQ GQTYQLDINQ ASNCLHGGRE GFNRKNWHLG QLPDGVRLSL VSPDGDMGFP GNCTVQLDYR LAANNLYVEI LASVDKPCPV SLTQHSYFNL DGTSNNHQHQ IQIDATRYLT MNEVGIPMGI AEVKDSIFDL TQGVTLGEKL HDPTLASTRG YDHCYLMDNL DGSLRRFGCL SSPVSGRAMT VFTNQPGVQL YCANFLAGTL GRNQQRLNQY QGVCIEPQML PDSPNQTQLG QDVWLVPGKI YHHISRYQFD TES
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