| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0667 |
|---|
| Symbol | |
|---|
| ID | 1168528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 685179 |
|---|
| End bp | 686780 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637342653 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716300 |
|---|
| Protein GI | 24372258 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4383] Mu-like prophage protein gp29 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGA AAACAACGGA ATCACGGATT TTAGACGCCA CAGGCCGCCC CTTTAAAGTG
CGTGAGGCTA AGGAGCTACA AACCGACGAT GTGCGCCTAG CTGGGCTGCA TCGAACTTTT
AGCAACCATC CTAGTAGCGG GTTAACGCCC GCCAGTGCTG CCAGTATTTT ACTGAGCGCC
GAACAAGGGG ATCTTATCGC TCAATGCGAG CTGGCCGAGG ATATCGAAGA GAAAGACGGT
CATCTTTTTG CCGAACTCGA CAAGCGCAAA CGGGCATTGA TTGGCGTCGA TTACTATCTG
GAACCGCCCA GCAACCCCAC CCCACAGGAA AAGGCCGATA CTGAGTATCT GCAACAAATG
CTGGAGGAAG GCGGTTGGAT TAAGTCGCTT ATCAAAAGCA TCGCCGATGC CATTCTTAAG
GGGTTTAGCA TGCACGAGCT TGCCTGGTCG CGTGAGCTGG GCGAGTGGTT TGTCGAGGTG
CCAGAGTATC GCGATCCCTC GTGGTTTATG ACTCACCCCG AGCGCCGCAA TGAGCTACGA
CTGCGTGACT CAACTCATGA GGGTGCAGAG CTGTGGCCCT TTGGTTGGAT TAAACATATC
CACCCTGCCA AGTCGGGCTA TGTGAGCCGC AGTGGTTTGG TGCGCCAATT GATTTGGCCA
TTCATTTTTA AAAACTACAG CGTGCGTGAT TTGGCCGAGT TCCTTGAGAT CTACGGTTTA
CCGCTGCGCA TTGGTCAGTA TCCAGCGGGA GCCAGCGATG GGGAAAAACG TGCCCTATTA
AACGCGGTCA TGAGCATTGG CCACAATGCG GGCGGCATTA TGCCCAAGGG CATGGTGATG
GATTTTCATA GCGCTGCGAC AGGCCAAGCC GATCCGTTTG AACTCATGAT GACATGGGCT
GAAAAGACCA TGAGCAAGGT GATTTTGGGC GGCACCTTAA CCACCCAAGC CGATGGCAAA
AGCTCCACCA ATGCGTTAGG TAACGTGCAT AACGAAGTGC GCCAAGAGCT GCGTGATGCC
GACCTTGCGT TAGTTGCCGA GACCTTAACC CGCGATTTAA TCGCGCCCCT CTATGCGCTT
AACTGTAAGA GTTACCGCAG CCACCGCCGT CACCCTCGTT TGGTGTTTGA TACCACCGAG
GCCGAAGATT TACGCGCCTT GGCCTATCCG CTGCGGGCGT TCGTGAGTAT GGGCATGCAG
ATCCCGCAAA ACTGGCTGCA TGAAAAGACC CGTATACCTA AACCTGCTAA TGGCGAAGCT
GTGCTGGTGA TCCAACAGGA CGACCCTAAT GCCACTGCTG CCAGCCAGAC GGCCTTGGCA
GCACTCTCTG CGAAAGAGGG GGCCGCCAAG CAGCCAGATG CCTCGTTAAA TGAACCGAGC
CAAACCGCCT TAGATAAGGC GCTAGATGCA CTCACCCAAG GCCAAATGAG TGAAGCCTAT
ATGGGGATGG TTGAGCCATT ACTGGCACAA CTGCAGAGCG AGCCGGAGCA GCTGCGCGCC
CAGCTGGAAC AGAACTATCC CAACATGGAT ACCGAGCAGC TTACCGAAAC ACTTGCGCGG
TTAATGTTTG TGGCTGAACT GTGGGGAATG GCAAATGCCT AA
|
|---|
| Protein sequence | MQEKTTESRI LDATGRPFKV REAKELQTDD VRLAGLHRTF SNHPSSGLTP ASAASILLSA
EQGDLIAQCE LAEDIEEKDG HLFAELDKRK RALIGVDYYL EPPSNPTPQE KADTEYLQQM
LEEGGWIKSL IKSIADAILK GFSMHELAWS RELGEWFVEV PEYRDPSWFM THPERRNELR
LRDSTHEGAE LWPFGWIKHI HPAKSGYVSR SGLVRQLIWP FIFKNYSVRD LAEFLEIYGL
PLRIGQYPAG ASDGEKRALL NAVMSIGHNA GGIMPKGMVM DFHSAATGQA DPFELMMTWA
EKTMSKVILG GTLTTQADGK SSTNALGNVH NEVRQELRDA DLALVAETLT RDLIAPLYAL
NCKSYRSHRR HPRLVFDTTE AEDLRALAYP LRAFVSMGMQ IPQNWLHEKT RIPKPANGEA
VLVIQQDDPN ATAASQTALA ALSAKEGAAK QPDASLNEPS QTALDKALDA LTQGQMSEAY
MGMVEPLLAQ LQSEPEQLRA QLEQNYPNMD TEQLTETLAR LMFVAELWGM ANA
|
|---|
| |