| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0633 |
|---|
| Symbol | mrcB |
|---|
| ID | 1168496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 660661 |
|---|
| End bp | 662967 |
|---|
| Gene Length | 2307 bp |
|---|
| Protein Length | 768 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637342621 |
|---|
| Product | penicillin-binding protein 1B |
|---|
| Protein accession | NP_716266 |
|---|
| Protein GI | 24372224 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTC ATACGACAAA AAAAGCGCCA GCCCAACGTA AAGCGAAGCG AAGCCGTGGC
CTGTTTGGGC ACATTTGGTC GCTCACCTGG AAGCTCGCCT TAATCGGCCT CGCCGTTGTG
ACCTTCTACG GTATTTACCT CGACCAAATT ATCGCCCGTA AGTTTGAAGG GCAAAAATGG
CATTTGCCTG CTCAAGTTTT TAGCCGCTCC ATGGCGTTAT ACCCAGGAGC TGCGGTGAGT
CATCCGCAGT TGATGGCCGA GTTAAAGCTA CTTGGCTATC GCAAAGTGGC TAACCCCCGC
GAGGTTGGTG AGTTTTCGGC ATCGAGCACC AAAATCGAAT TATGGCGTCG ACCCTTTTTA
CATCCCGAAG GCGATCAGCC AGAACAGCGA GTGATGATCA CGTTCGATAG TGAAGGCGTC
AGCGCGATTG CCCGAATGGA AGATAAGCGC CAGTTAGCGG TATTCCATTT AGAACCCGTT
TTACTTGACC GCATGATCAC CGGCGACGGT GAAGACAGGC TCTTTGTCTC TACCGAAGAG
ATGCCCAAAC CTATTGTGCA GGCGCTATTG CTGGTGGAAG ACCGGAGTTT TTACGAGCAC
CACGGGGTGA ATCCTTTTGC AATTTTGCGT GCGGCCTTTG TGAACATCAC CGCTGGGCGA
ACCGTACAGG GTGGCTCAAC CCTTACTCAG CAGTTGGCAA AAAACTTCTT TCTGTCGAGC
GAGCGCTCGT TGCTGCGTAA AGTTCGCGAA GCTCTAATGG CGGTGATTAT CGATTTTCGC
TACAGCAAGG ACGAGATTCT CGAGGCTTAT CTCAACGAAG TGTATATGGG GCAAGATAAA
TCCCGTGCCG TACATGGTAT GGGCTTGGCT TCGCAATTCT ATTTTGGTCG TCCCATCGGC
GAGCTAACCA CGGCGCAGCA AGCCTTTTTA GTGGCGGCGA TTAAGGGGCC ATCTTACTAC
AACCCATGGC GTTACCCAGA GCGCAGCTTA GAGCGCCGCG ATTTAGTGCT GCGGCTATTA
ATGGAGTCGG GCGAGTTAAA CACTGCGCAA TATAAGGTAG CTGTGGAGTC GCCCTTAGGT
TTGCGTAATG CCAATAAGCC AGTGCATCAA AAATTACCAT CGTTTTATGC CTTGGTAAAA
CAAGAGGTTA ATCAGCGCTA CGGTGATGCG TTATTAAAAC AATCTGGGGT GAAGATTTAT
ACCACTCTTG ATCCTATGGC GCAGGAAGCC GCCGAAATCG CTGTGACTCA AACCTTTAAG
AGCTTAGATA AGGGCAATAA GTCGTTGCAG ATTGGTATGG TGGTCACCGA CAAATACACT
GGCGGTATCG CGGCTATGGT GGGTGATAAA ACGCCGGGCT TTGACGGTTA TAACCGCGCA
GTGGAGATCC GCAGACCGAT TGGCTCGCTT ATCAAGCCAT TTGTGTATGC GACCGCCTTG
GCGCCTAATA GTCAATTTAC CTTGGCATCG CCACTGAAAG ATCAGCCGAT TACCTTGAAA
AATGAGCAAG GCAAAACCTG GTCACCGCAG AACTTTGATA AGACGTTTAG CGGCCAAGTC
TCGCTGTTAA CGGCGCTTAA AAAATCGATG AACGTGCCGA CGGTAAACCT TGGGATTGCC
GTTGGAGTCG ATGCAGTGGT GACGACGTTA GCCAAATCGG GTTGGGAAGA ACCGCTTAAC
GAATATCCAT CGATGCTACT GGGCGCGGTG AATGGCTCGC CCTTAATGGT GGCGCAGGTT
TATCAAACCC TCGCCGATAG CGGCGCTTAC CGTAAACTCA CTACAGTCAC CGCAGTGCTC
GATAGTGATA ATCAGCCTTT ACCCGTAACG CGTTCAGCCA AGGAGCAAGC GATTACGCCG
GATACCGACT TTTTGGTGCA ATATGCCATG CAGCAAGTCG TGCGCTCCGG AACGGCAACG
CGCTTAGGCA ACGCCTTCCC CGGTGTGGCA CTGGCGGGTA AAACTGGTAC CAGTAACGAT
AGCCGTGATT CTTGGTTCGC CGGTTTTGAT GAGCGTAACG TGGCGGCAAT TTGGGTCGGA
CGCGACGATA ACGGTAAAAC CAGTCTTTAT GGCAGCAGCG GGGCGATGGC GGTATACCAA
GCCTTTTTGA AGGAACGACC ACCCATTGGG CTGCGTTCTA TTCCACCCAG TGGCGTGATC
AAAGGTTATT TTGACCGTGA CACCGGTGAA GCAAAAGAAG CAGGATGCAG CAATACCGAG
GCATTACCCG CGCTGAGAGG CACCTATAAT CCCGCTAAAA ACTGTGGCGA GCCGTTGCAG
TGGTGGCAGA AGATTTTAGG TCAGTAA
|
|---|
| Protein sequence | MTTHTTKKAP AQRKAKRSRG LFGHIWSLTW KLALIGLAVV TFYGIYLDQI IARKFEGQKW
HLPAQVFSRS MALYPGAAVS HPQLMAELKL LGYRKVANPR EVGEFSASST KIELWRRPFL
HPEGDQPEQR VMITFDSEGV SAIARMEDKR QLAVFHLEPV LLDRMITGDG EDRLFVSTEE
MPKPIVQALL LVEDRSFYEH HGVNPFAILR AAFVNITAGR TVQGGSTLTQ QLAKNFFLSS
ERSLLRKVRE ALMAVIIDFR YSKDEILEAY LNEVYMGQDK SRAVHGMGLA SQFYFGRPIG
ELTTAQQAFL VAAIKGPSYY NPWRYPERSL ERRDLVLRLL MESGELNTAQ YKVAVESPLG
LRNANKPVHQ KLPSFYALVK QEVNQRYGDA LLKQSGVKIY TTLDPMAQEA AEIAVTQTFK
SLDKGNKSLQ IGMVVTDKYT GGIAAMVGDK TPGFDGYNRA VEIRRPIGSL IKPFVYATAL
APNSQFTLAS PLKDQPITLK NEQGKTWSPQ NFDKTFSGQV SLLTALKKSM NVPTVNLGIA
VGVDAVVTTL AKSGWEEPLN EYPSMLLGAV NGSPLMVAQV YQTLADSGAY RKLTTVTAVL
DSDNQPLPVT RSAKEQAITP DTDFLVQYAM QQVVRSGTAT RLGNAFPGVA LAGKTGTSND
SRDSWFAGFD ERNVAAIWVG RDDNGKTSLY GSSGAMAVYQ AFLKERPPIG LRSIPPSGVI
KGYFDRDTGE AKEAGCSNTE ALPALRGTYN PAKNCGEPLQ WWQKILGQ
|
|---|
| |