Gene SO_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0624 
Symbolcrp 
ID1168490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp650745 
End bp651380 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID637342615 
ProductcAMP-regulatory protein 
Protein accessionNP_716257 
Protein GI24372215 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTGA TTGGTAAGCC AAAACCAGAC CCAACTTTGG AATGGTTTTT ATCACACTGT 
CACATTCATA AGTATCCCGC TAAAAGCACC TTGATCCATG CTGGTGAAGA CTCAGACACC 
CTTTATTACA TCGTAAAAGG TTCTGTTGCG GTATTGATTA AAGATGAAGA AGGTAAGGAA 
ATGATCCTAT CTTATCTTAA TCAAGGCGAC TTTATCGGTG AGTTAGGATT GTTCGAAGAA 
CAAGCTGAAC GTACCGCTTG GGTTCGTGCT AAACAGGCAT GCGAAATTGC GGAAATCTCT 
TACAAGAAAT TTAAGCAATT AATCCAAGTT AACCCTGAAA TTTTGATGAA GCTATCGGCT 
CAAATGGCGT ATCGCCTGCA GAGCACCAGC CAGAAAGTGG GCAATTTAGC TTTCCTCGAT 
GTGGCAGGTC GGATTGCGCA AACATTGTTG CATTTAGCCA AACAACCCGA TGCCATGACA 
CACCCAGACG GTATGCAAAT TAAGATCACT CGCCAAGAAA TTGGCCAGAT CGTTGGTTGC 
TCCCGCGAAA CTGTGGGTCG TATCTTAAAG ATGCTTGAAG AACAAAATCT CATTCAAGCA 
CACGGTAAAA CCATTGTGGT ATATGGTACC CGTTAA
 
Protein sequence
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE 
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFKQLIQV NPEILMKLSA 
QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC 
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R