| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0621 |
|---|
| Symbol | |
|---|
| ID | 1168487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 648335 |
|---|
| End bp | 649663 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637342612 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_716254 |
|---|
| Protein GI | 24372212 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTA TTCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTATTGGT GTTAGGCACA
GTGATTGGAC TCATATTATT TGAGTCCATG CTGCGCCAAG CGTTTCATGA CTCGATTATC
AATCGCTTAG AAGAAGATTT AGAGCACATT ATGCTGGCGA CCCATTTCAA TAATGGGGAG
ATCCATATCG ATCAAAGCCA ACTATCAAGC TTTTACCGCC CCGCCTATTC GGGGCGTTAT
TTCCAGCTCA ACCTCCCCAA TGAAGTGATC CGCTCCCGTT CACTTTGGGA TATGCAGCTC
GATATCGAGC CTTTAGCACC AAGTCAAACC CGAGTTTGGC AGGCAAAGGG ACCCAAAAAC
AATGACATGC AGTTATTATC CCTAGGATTA AATTCCAGCA GCGCGAATGT AACCGCGACA
CTCACCGTGG CGCAGGACTT GAGTATCGGT CGACGGGTAT TTAGTGAAGT CTACGGCACT
AAGCTTGGGG TTAACCTTGC AATGTTAGTG GCGATGATCG CGGGGATCTT CTTAATCCTG
CGCCAATCGT TTAAGCCCGT GAAACAAATC CAACATGCGC TATCACGCCT ACAAGAAGGT
GAGATTAAGG CCTTGGAGTT AAACAATATT CCACCGGAAG TTCAGCCGCT GGCCAAGACC
TATAACGAAT TACTGGAATA CACCGCCAAG CAAATTGAAC GCAGCCGAAA TAACTTAGGT
AATTTAAGCC ACGGCCTAAA AACCCCACTG GCCGTAATGC AGCAACAGGT CGAAGCCTTA
GGCCTTAAAG ATCCCGAGAC CGCTATGGCG CTGCAACAAC AGCTCGATGC GATCCATAAA
ATGGTCGAAC GTAAGCTCGC CGCAGCGCGG ATCACTGGCG ATATGTTGCC CGCAGCGCAG
TTAGTGGTCC CAAGGGATCT CCATAGCCTC GCCAATACCC TAAACAAAGT GCATAGAAGC
AAAAACATCA GCTGCAACTT TGAGCTTGAC CCGAGTATCC AGCGTCTACC CATCCATCGG
GAAGATGGTA TGGAGCTTTT AGGTAATCTG TTAGATAACG CCTTTAAATG GGCGGATAGC
CAAGTCACAG TCAAACTTTG GAAAGCACAA AACAAACTGT ATCTCAGCAT TGATGATGAT
GGCCCAGGCG TTGCCGATGA TGAACTGGAT AAACTCACCC AAAGGGGAAC TCGACTCGAT
GAATCGGTCA TGGGCCATGG TTTAGGTTTA TCGATAGTCA AGGAAATCGC CGAGCAATAT
GGCATTGAGC TTAAATTTAC CCACAGCCGC CGATTATCTG GACTCTGTAT TGAGCTGGTA
TTGAGTTAA
|
|---|
| Protein sequence | MISIRTKLSL WLTGLLVLGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHFNNGE
IHIDQSQLSS FYRPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPSQT RVWQAKGPKN
NDMQLLSLGL NSSSANVTAT LTVAQDLSIG RRVFSEVYGT KLGVNLAMLV AMIAGIFLIL
RQSFKPVKQI QHALSRLQEG EIKALELNNI PPEVQPLAKT YNELLEYTAK QIERSRNNLG
NLSHGLKTPL AVMQQQVEAL GLKDPETAMA LQQQLDAIHK MVERKLAAAR ITGDMLPAAQ
LVVPRDLHSL ANTLNKVHRS KNISCNFELD PSIQRLPIHR EDGMELLGNL LDNAFKWADS
QVTVKLWKAQ NKLYLSIDDD GPGVADDELD KLTQRGTRLD ESVMGHGLGL SIVKEIAEQY
GIELKFTHSR RLSGLCIELV LS
|
|---|
| |