| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0619 |
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| Symbol | astD |
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| ID | 1168485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 645826 |
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| End bp | 647289 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637342610 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | NP_716252 |
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| Protein GI | 24372210 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATT TTATTAAAGG CCAGTGGCAT ACCGGTAAGG GTCATGATGT GGCCTCGAGT
AACCCTGCCA ATGGCGAAAT TATCTGGCGT GGCCAAACAG CTACCGCTGA ACAAGTTAAC
GCCGCAGTCG ATGCCGCCCG TGAGGCACAA TTTGATTGGT TTATATTGGG TTTTGATGCG
CGTTTAAAGA TAGTTGAAGC CTATCGTAGT CAACTCGAAG CCAATAAAGC TGAATTAGCC
GAAACGATTG CGCAAGAAAC CGGTAAACCC CAATGGGAAA CCGCAACTGA AGTGGCTGCC
ATGATCGGTA AGATTGGTCT GTCGGCCAGT GCTTACAATA AGCGCACCGG CACTGAAACC
AATGACACTC CGGCTGGGCG CGCCGTGCTG CGCCATAAAC CCCATGGCGT GGTTGCCGTG
TTTGGGCCTT ATAATTTTCC AGGGCATTTA CCCAATGGCC ATATCGTCCC TGCATTGCTT
GCGGGTAATT CCGTGGTGTT TAAACCCTCT GAATTAACGC CAAAAGTTGC CGAGTTAATG
GTTACGCTTT GGGAAAAGTC GGGTCTGCCC GCAGGTGTAC TTAACTTAGT CCAAGGTGAA
GTCGACACGG GCAAGGCGCT AGCGTCTCAC CCACAACTTG ACGGCTTGTT CTTTACTGGC
AGCTCTCGCA CGGGTCACTT ATTGCATCAA CAATATGCGG GTCATCCGGG GAAAATCCTC
GCCTTAGAAA TGGGTGGTAA TAACCCGCTG ATTATCAAAG GCGTTGCCGA TATTAAAGCC
GCGGTGCACG ATATTTTGCA ATCGGCTTAT ATTTCGTCAG GCCAACGTTG TACCTGTGCC
CGCAGGCTTT ATGTTGAGCA AGGCGAGCAG GGTGATGCCT TAGTGGCCAA GTTGGTTGAA
GCGGTTAAGC AGATTAAAGT CGGACCTTGG AACGCGCAGC CACAACCATT TATGGGCTCA
ATGATTTCCG AAGCGGCAGC GAAAGGTATG GTGGCGGCGC AGGCTAACTT ACTGAGTTTA
GGCGGGGTGC CTTTGGTTGA ACTTATGCAT TTACAAGCGG GAACAGGCTT AGTGTCGCCC
GGGCTTATCG ATGTGACTGC GGTGAGTGAG TTGCCCGATG AAGAATACTT CGGTCCACTG
CTACAACTGG TGCGCTACAG TGATTTCGAT CAGGCGATTA AGCTAGCGAA TCAAACTCGC
TATGGCCTAT CGGCAGGTAT TTTGGCAGAT AGCCGTGAGG ATTATGAGTA TTTTCTCGCC
CGCATTCGTG CTGGCATTGT TAACTGGAAC AAGCAGATCA CAGGTGCCTC GGGGGCCGCG
CCTTTTGGTG GCGTAGGCGC TTCGGGTAAC CACAGAGCGA GTGCGTTTTA TGCCGCCGAT
TATTGTGCAT ATCCTGTTGC CTCCGTTGAG GCTGATGCGG TGAGCTTGCC GGCAACTCTA
AGCCCTGGAT TAACTTTATC GTGA
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| Protein sequence | MTHFIKGQWH TGKGHDVASS NPANGEIIWR GQTATAEQVN AAVDAAREAQ FDWFILGFDA
RLKIVEAYRS QLEANKAELA ETIAQETGKP QWETATEVAA MIGKIGLSAS AYNKRTGTET
NDTPAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNSVVFKPS ELTPKVAELM
VTLWEKSGLP AGVLNLVQGE VDTGKALASH PQLDGLFFTG SSRTGHLLHQ QYAGHPGKIL
ALEMGGNNPL IIKGVADIKA AVHDILQSAY ISSGQRCTCA RRLYVEQGEQ GDALVAKLVE
AVKQIKVGPW NAQPQPFMGS MISEAAAKGM VAAQANLLSL GGVPLVELMH LQAGTGLVSP
GLIDVTAVSE LPDEEYFGPL LQLVRYSDFD QAIKLANQTR YGLSAGILAD SREDYEYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADAVSLPATL
SPGLTLS
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