Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0617 |
Symbol | argD |
ID | 1168483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 643453 |
End bp | 644670 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342608 |
Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
Protein accession | NP_716250 |
Protein GI | 24372208 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases [TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTG ATATGAAGTT GAATCGTGCC CAATTTGATG CGGTGATGGT GCCTAACTAT GCGCCAGCAG CAGTGATTCC AGTACGTGGC GAAGGTAGCC GAGTATGGGA TCAAGAGGGT AATGAGTTTA TCGATTTTGC TGGCGGTATT GCGGTAAATT GCTTAGGTCA CTGTCATCCT GCCTTAGTGA ATGCCTTAAA AACTCAAGGC GAAAAATTAT GGCACCTCTC TAACGTGATG ACCAACGAGC CAGCACTCGA ACTGGCCACT AAGCTAGTGA ATAGCACGTT TGCTGAGCGT GTCTATTTTG CCAACTCTGG CGCTGAAGCC AACGAAGCTG CCCTCAAATT AGCCCGTCGG TATGCCTTAG AAAAGCATGG CGTTGAGAAA GACGAAATCA TCGCTTTCGA TAAAGCCTTC CACGGTCGTA CATTTTTTAC CGTGAGTGTT GGCGGTCAAG CTGCCTATTC AGATGGTTTT GGTCCAAAAC CACAAAGCAT TACTCACTTA CCGTTTAACG ATGTCGCGGC ACTAGAAGCC GCCGTATCAG ATAAAACCTG TGCAATTATG CTGGAGCCGC TACAAGGCGA GGGCGGTATT ATCGATGCAG ATCCTGCGTT CCTCAAAGCC GTGCGTGAAC TGGCTAACAA GCACAATGCG CTGGTGATTT TCGATGAGGT GCAAACTGGT GTTGGCCGTA CCGGTGAGCT CTATGCCTAC ATGGGAACCG ACATTGTGCC GGATATTCTG ACGACAGCTA AAGCGCTTGG CGGTGGTTTC CCCATTGCTG CTATGCTCAC TACTACAGAA ATTGCTGAGC ATTTGAAAGT GGGTACTCAC GGTTCAACCT ATGGTGGTAA CCCGCTGGCC TGCGCAATAG GTAATGCGGT ATTAGACGTA GTCAACACCC CAGAAGTCTT GAATGGTGTT AAGCATCGCG AGCAATTATT ACGTGATGGT TTGAACAAGA TTAATGAAAA ATATCATGTT TTCTCTGAAG TTCGCGGTAA AGGCTTGCTG TTAGGGGCTG TGCTCAATGA GCAATACCAA GGTCGTTCGC GTGACTTTTT AGTGGCTTCT GTGGCTGAAG GTTTAATGAG CCTAATGGCG GGGGCGAATG TGGTACGTTT TGCGCCTTCA CTGGTGATCC CTGAGGCAGA TATCGCAGAG GGCCTAGCAC GTTTTGAACG TGCTGTGGCG AGTATCGCCG CAGCCTAA
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Protein sequence | MSVDMKLNRA QFDAVMVPNY APAAVIPVRG EGSRVWDQEG NEFIDFAGGI AVNCLGHCHP ALVNALKTQG EKLWHLSNVM TNEPALELAT KLVNSTFAER VYFANSGAEA NEAALKLARR YALEKHGVEK DEIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHL PFNDVAALEA AVSDKTCAIM LEPLQGEGGI IDADPAFLKA VRELANKHNA LVIFDEVQTG VGRTGELYAY MGTDIVPDIL TTAKALGGGF PIAAMLTTTE IAEHLKVGTH GSTYGGNPLA CAIGNAVLDV VNTPEVLNGV KHREQLLRDG LNKINEKYHV FSEVRGKGLL LGAVLNEQYQ GRSRDFLVAS VAEGLMSLMA GANVVRFAPS LVIPEADIAE GLARFERAVA SIAAA
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