| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0612 |
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| Symbol | sspB |
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| ID | 1168478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 637024 |
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| End bp | 637461 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342603 |
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| Product | ClpXP protease specificity-enhancing factor |
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| Protein accession | NP_716245 |
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| Protein GI | 24372203 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2969] Stringent starvation protein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTGT TGACTCCAAA TCGTCCTTAT TTACTCAGGG CTTACTACGA TTGGTTGATG
GACAACCAAT TAACACCTCA CGTTGTTGTG GATGCCTTTG TGAAAGGCAC TCAAGTACCG
CAGCAATATG TGAAGGACGG CCAGATCGTA TTAAATATCG CGGCCGGCGC AGTGGGCAAT
TTGCAAATTA GTAATGAATT TGTGGAGTTC AATGCGCGTT TTGGTGGTGT GCCTCAGCAG
GTGCTATTGC CAATGGCTTC GATTGTGGCC ATATACGCCC GTGAAAATGG CGCAGGGACG
GTCTTTGACA TTGAAGATGC GTACTTAGTG GAAGATGAAG CTGAATCGAC ATTGTCTGTT
ATTGAGACCG CCGAGAAGCC AACTGAACCC AAGGACGAGC CGCCTAAGCG TCGTAGCCAT
TTAACCTTAG TTAAATAA
|
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| Protein sequence | MKVLTPNRPY LLRAYYDWLM DNQLTPHVVV DAFVKGTQVP QQYVKDGQIV LNIAAGAVGN
LQISNEFVEF NARFGGVPQQ VLLPMASIVA IYARENGAGT VFDIEDAYLV EDEAESTLSV
IETAEKPTEP KDEPPKRRSH LTLVK
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