Gene SO_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0610 
SymbolpetC 
ID1168476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp635603 
End bp636298 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content46% 
IMG OID637342601 
Productubiquinol-cytochrome c reductase, cytochrome c1 
Protein accessionNP_716243 
Protein GI24372201 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TATTGATTGC ATTAGTTACC TTGTTGCCGA CCTTGGCAAT TGCCGCTGGC 
GGACAAGTAC ATTTAGAAGA TGCCAATGTT GATCTGCATG ATAAGGCTTC TTTAGAGCGT 
GGTTTGGGCT TATTCCAGCA CTATTGCTCT GGTTGTCATA GCACTCAGTA TCAACGCTAT 
GAGCGTGTGG CGAACGATCT CGGTATTTCT GCCGATGATA TGCGTAACAA GTATATGTTC 
ACCGATGCAA AAATTGGTGA ATTGATGCAA AACGCAATTC CGCCAAAAGA TGCGGCTAAG 
TGGTTTGGTG CCACACCACC AGACCTCACC TTAGTGGCAC GTGTTCGTGG CGAAGATTGG 
GTTTATTCAT ACCTAAAAGG CTTCTACAAA GATCCAAGCC GTCCATTTGG CGTAAACAAC 
ACTGTATTCC CATCAGTGGG TATGCCGCAT GTTCTTGAAG AGCTGCAAGG CACACCTGTT 
AAGCAGGAAG ATGGTACAAT CGTGGTCTCT GGTGGTAAGT TAAATGCCGA AGAGTACGAC 
CAAGCTGTGC GTGATATCAC GGGCTTCTTA GTCTATTCGG CTGAACCTGT TAAGTTAGAG 
CGTCAAGCGC TAGGCTGGTG GGTGCTCGGA TTCTTGTTTA TCTTCTTTAT TGTGGCCTAC 
CTCTTGAAGA AAGAGTACTG GAAAGATGTA CACTAG
 
Protein sequence
MKKLLIALVT LLPTLAIAAG GQVHLEDANV DLHDKASLER GLGLFQHYCS GCHSTQYQRY 
ERVANDLGIS ADDMRNKYMF TDAKIGELMQ NAIPPKDAAK WFGATPPDLT LVARVRGEDW 
VYSYLKGFYK DPSRPFGVNN TVFPSVGMPH VLEELQGTPV KQEDGTIVVS GGKLNAEEYD 
QAVRDITGFL VYSAEPVKLE RQALGWWVLG FLFIFFIVAY LLKKEYWKDV H